The 2.0 version of rSNPBase

Variant report

Variant rs59097599
Chromosome Location chr10:97135476-97135477
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97070400-97139600 Weak transcription Fetal Brain Male brain
2 chr10:97102200-97136400 Weak transcription Fetal Kidney kidney
3 chr10:97107200-97151800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr10:97109000-97148000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr10:97116000-97138200 Weak transcription Ovary ovary
6 chr10:97116400-97139600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr10:97116400-97142400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr10:97116600-97139400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr10:97116800-97137600 Weak transcription Fetal Muscle Leg muscle
10 chr10:97116800-97141400 Weak transcription Fetal Lung lung
11 chr10:97117400-97139200 Weak transcription Brain Germinal Matrix brain
12 chr10:97117600-97138000 Weak transcription Fetal Muscle Trunk muscle
13 chr10:97118000-97135800 Weak transcription Fetal Brain Female brain
14 chr10:97118000-97137800 Weak transcription Pancreas Pancrea
15 chr10:97120400-97141400 Weak transcription Gastric stomach
16 chr10:97121000-97148000 Weak transcription Esophagus oesophagus
17 chr10:97122000-97149400 Weak transcription Spleen Spleen
18 chr10:97124800-97137200 Strong transcription Skeletal Muscle Female skeletal muscle
19 chr10:97126200-97139400 Weak transcription Lung lung
20 chr10:97126800-97137800 Weak transcription HepG2 liver
21 chr10:97129400-97137800 Weak transcription Right Atrium heart
22 chr10:97129600-97136400 Strong transcription Left Ventricle heart
23 chr10:97130000-97138000 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr10:97130200-97141600 Weak transcription Fetal Intestine Small intestine
25 chr10:97130200-97156600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr10:97130800-97137800 Weak transcription Fetal Stomach stomach
27 chr10:97131200-97140200 Weak transcription H9 Cell Line embryonic stem cell
28 chr10:97131200-97140200 Weak transcription HSMM muscle
29 chr10:97131400-97137800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr10:97131600-97139800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr10:97131800-97140200 Weak transcription H1 Cell Line embryonic stem cell
32 chr10:97132000-97137800 Weak transcription HSMMtube muscle
33 chr10:97132000-97139200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr10:97132000-97139200 Weak transcription Fetal Intestine Large intestine
35 chr10:97132600-97137800 Weak transcription Psoas Muscle Psoas
36 chr10:97133000-97136200 Weak transcription Placenta Placenta
37 chr10:97133000-97142400 Genic enhancers Adipose Nuclei Adipose
38 chr10:97134000-97137400 Genic enhancers Duodenum Smooth Muscle Duodenum
39 chr10:97134200-97136000 Genic enhancers Colon Smooth Muscle Colon
40 chr10:97134200-97136200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr10:97134600-97135800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr10:97134600-97136400 Enhancers Cortex derived primary cultured neurospheres brain
43 chr10:97134600-97137200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr10:97134800-97135800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
45 chr10:97134800-97135800 Genic enhancers Stomach Smooth Muscle stomach
46 chr10:97134800-97136400 Genic enhancers Rectal Smooth Muscle rectum
47 chr10:97134800-97136800 Enhancers GM12878-XiMat blood
48 chr10:97134800-97137400 Genic enhancers Fetal Heart heart
49 chr10:97135000-97135600 Genic enhancers Brain Cingulate Gyrus brain
50 chr10:97135000-97135800 Genic enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015