Variant report

Variant rs59120980
Chromosome Location chr7:98017730-98017731
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:97990400-98028000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr7:97992000-98029400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr7:97995800-98028200 Weak transcription Esophagus oesophagus
4 chr7:98002600-98027600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr7:98003000-98021600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr7:98003000-98023600 Weak transcription Hela-S3 cervix
7 chr7:98005800-98018400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr7:98007400-98028000 Weak transcription Fetal Stomach stomach
9 chr7:98007800-98018400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr7:98009800-98017800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr7:98010400-98021200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr7:98011200-98020800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr7:98011200-98021000 Weak transcription GM12878-XiMat blood
14 chr7:98011200-98021200 Weak transcription HepG2 liver
15 chr7:98013600-98023600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr7:98014200-98027200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr7:98014600-98027400 Weak transcription Fetal Intestine Large intestine
18 chr7:98014800-98018200 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr7:98016200-98018000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr7:98016400-98017800 Enhancers Duodenum Mucosa Duodenum
21 chr7:98016400-98018200 Enhancers Rectal Mucosa Donor 31 rectum
22 chr7:98016400-98018600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr7:98016400-98019200 Enhancers Liver Liver
24 chr7:98016600-98018000 Strong transcription NHEK skin
25 chr7:98016600-98018400 Weak transcription H9 Cell Line embryonic stem cell
26 chr7:98016600-98018600 Enhancers Stomach Mucosa stomach
27 chr7:98016800-98018000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr7:98016800-98021200 Weak transcription Fetal Intestine Small intestine
29 chr7:98016800-98024000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr7:98016800-98027600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr7:98017200-98018000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr7:98017200-98018000 Weak transcription Fetal Muscle Trunk muscle
33 chr7:98017200-98018000 Genic enhancers A549 lung
34 chr7:98017400-98017800 Weak transcription Fetal Muscle Leg muscle
35 chr7:98017400-98017800 Enhancers Pancreas Pancrea
36 chr7:98017400-98018600 Enhancers Gastric stomach
37 chr7:98017600-98017800 Enhancers Colonic Mucosa Colon
38 chr7:98017600-98018000 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr7:98017600-98023600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr7:98017600-98027800 Weak transcription Rectal Mucosa Donor 29 rectum

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