Variant report

Variant	rs59141477
Chromosome Location	chr21:47745630-47745631
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr21:47742587-47746479	K562	blood:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
2	PBX3	chr21:47745501-47745776	GM12878	blood:	n/a	n/a
3	POLR2A	chr21:47745622-47745641	HepG2	liver:	n/a	n/a
4	CTCF	chr21:47745500-47745650	SK-N-SH_RA	brain:	n/a	n/a
5	BACH1	chr21:47744492-47745635	H1-hESC	embryonic stem cell:	n/a	n/a
6	MAX	chr21:47742515-47745712	MCF-7	breast:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
7	HEY1	chr21:47741828-47745760	K562	blood:	n/a	chr21:47744008-47744023 chr21:47744005-47744020 chr21:47744397-47744412 chr21:47743927-47743942
8	TBP	chr21:47743092-47745722	K562	blood:	n/a	n/a
9	CTCF	chr21:47745620-47745770	SK-N-SH_RA	brain:	n/a	n/a
10	ZC3H11A	chr21:47745207-47745693	K562	blood:	n/a	n/a
11	SIN3AK20	chr21:47742089-47746602	MCF-7	breast:	n/a	n/a
12	POLR2A	chr21:47744470-47745856	Hela-S3	cervix:	n/a	n/a
13	KAP1	chr21:47745271-47746098	U2OS	brain:	n/a	n/a
14	POLR2A	chr21:47742243-47745780	Raji	blood:	n/a	n/a
15	MXI1	chr21:47745068-47745743	Hela-S3	cervix:	n/a	n/a
16	MAX	chr21:47744476-47745633	SK-N-SH	brain:	n/a	chr21:47745301-47745311 chr21:47745304-47745314
17	POLR2A	chr21:47745243-47745847	HepG2	liver:	n/a	n/a
18	MAZ	chr21:47742077-47745972	IMR90	lung:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
19	REST	chr21:47743182-47745741	H1-neurons	neurons:	n/a	chr21:47744263-47744276 chr21:47745264-47745274 chr21:47743785-47743798 chr21:47745148-47745168 chr21:47745187-47745200 chr21:47743938-47743956 chr21:47745148-47745168 chr21:47744741-47744754 chr21:47743941-47743954
20	CTCF	chr21:47745150-47745647	GM12878	blood:	n/a	n/a
21	CTCF	chr21:47745480-47745630	HAc	cerebellar:	n/a	n/a
22	POLR2A	chr21:47742363-47745770	MCF-7	breast:	n/a	n/a
23	SMC3	chr21:47745183-47745776	Hela-S3	cervix:	n/a	n/a
24	MAX	chr21:47743141-47745644	A549	lung:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
25	POLR2A	chr21:47736556-47745784	GM12891	blood:	n/a	n/a
26	HCFC1	chr21:47743201-47745778	K562	blood:	n/a	n/a
27	POLR2A	chr21:47742244-47745734	Hela-S3	cervix:	n/a	n/a
28	MAZ	chr21:47743563-47745689	Hela-S3	cervix:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
29	IRF1	chr21:47742864-47746399	K562	blood:	n/a	chr21:47744412-47744421 chr21:47744388-47744402 chr21:47743917-47743931 chr21:47744003-47744017 chr21:47743819-47743828 chr21:47746006-47746018
30	EP300	chr21:47745110-47745648	K562	blood:	n/a	n/a
31	MAX	chr21:47743436-47745793	Hela-S3	cervix:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
32	CTCF	chr21:47745580-47745730	K562	blood:	n/a	n/a
33	ZNF263	chr21:47744630-47745698	HEK293-T-REx	kidney:	n/a	chr21:47745232-47745253
34	CHD1	chr21:47743971-47745948	IMR90	lung:	n/a	chr21:47745132-47745142
35	CUX1	chr21:47745236-47746334	K562	blood:	n/a	chr21:47745614-47745623 chr21:47745612-47745621 chr21:47745614-47745623
36	CTCF	chr21:47745480-47745630	GM12872	blood:	n/a	n/a
37	RCOR1	chr21:47743555-47745809	K562	blood:	n/a	n/a
38	GATA1	chr21:47740015-47746721	K562	blood:	n/a	chr21:47742308-47742316 chr21:47740336-47740344
39	JUND	chr21:47745140-47745652	K562	blood:	n/a	n/a
40	BHLHE40	chr21:47744552-47745759	K562	blood:	n/a	n/a
41	MXI1	chr21:47742085-47745974	IMR90	lung:	n/a	n/a
42	MYC	chr21:47743042-47745730	K562	blood:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
43	E2F6	chr21:47742556-47745724	K562	blood:	n/a	chr21:47744322-47744331 chr21:47743819-47743828 chr21:47744323-47744330 chr21:47743986-47743995 chr21:47744323-47744330 chr21:47744323-47744330 chr21:47743955-47743964 chr21:47744322-47744334 chr21:47745132-47745141 chr21:47744412-47744421 chr21:47744013-47744023 chr21:47744004-47744013
44	MAX	chr21:47742272-47745697	K562	blood:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
45	CTCF	chr21:47745580-47745730	AG10803	skin:	n/a	n/a
46	MAX	chr21:47743402-47745816	HepG2	liver:	n/a	chr21:47744269-47744279 chr21:47745301-47745311 chr21:47745304-47745314
47	TEAD4	chr21:47745101-47745788	K562	blood:	n/a	n/a
48	STAT5A	chr21:47745223-47745768	GM12878	blood:	n/a	chr21:47745478-47745486 chr21:47745307-47745319
49	MTA3	chr21:47744925-47745706	GM12878	blood:	n/a	n/a
50	BACH1	chr21:47745241-47745780	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr21:47673462..47676957-chr21:47743809..47746402,3	MCF-7	breast:
2	chr21:47647133..47651941-chr21:47742263..47745700,6	K562	blood:
3	chr21:47742824..47746367-chr21:47874951..47878920,7	K562	blood:
4	chr21:47743042..47745765-chr21:47875975..47879914,6	MCF-7	breast:
5	chr21:47742444..47746489-chr21:47762555..47767445,7	K562	blood:
6	chr21:47390651..47391646-chr21:47745274..47746230,2	MCF-7	breast:
7	chr21:47645020..47650682-chr21:47742361..47746485,6	MCF-7	breast:
8	chr21:47647133..47651621-chr21:47740452..47747290,19	K562	blood:
9	chr21:47745116..47746621-chr21:47754846..47756974,2	MCF-7	breast:
10	chr21:47603167..47605215-chr21:47743246..47745709,3	K562	blood:
11	chr21:47700722..47725192-chr21:47732201..47746452,77	K562	blood:
12	chr21:47701944..47708797-chr21:47740125..47746082,20	MCF-7	breast:
13	chr21:47602847..47606841-chr21:47742668..47745795,6	K562	blood:
14	chr21:47741705..47745829-chr21:48053977..48057908,5	MCF-7	breast:
15	chr21:47646269..47649125-chr21:47743785..47746480,4	MCF-7	breast:
16	chr21:47744820..47747275-chr21:47755584..47759205,4	MCF-7	breast:
17	chr21:47702151..47710134-chr21:47741079..47747645,22	MCF-7	breast:
18	chr21:47702524..47712328-chr21:47732975..47746274,46	K562	blood:
19	chr21:47724056..47726526-chr21:47744918..47748024,3	MCF-7	breast:
20	chr21:47743254..47746166-chr21:47876901..47880445,4	MCF-7	breast:
21	chr21:47671137..47673636-chr21:47743740..47746096,3	K562	blood:

Variant related genes	Relation type
C21orf58	TF binding region
ENSG00000160294	Chromatin interaction
ENSG00000160299	Chromatin interaction
ENSG00000182362	Chromatin interaction
ENSG00000239415	Chromatin interaction
ENSG00000160310	Chromatin interaction
ENSG00000215424	Chromatin interaction
ENSG00000160284	Chromatin interaction
ENSG00000160305	Chromatin interaction
ENSG00000160285	Chromatin interaction
ENSG00000228404	Chromatin interaction

Extended variants
information (count: 40 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs16979065	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17176170	0.88[AMR][1000 genomes]
rs17176352	0.82[AMR][1000 genomes]
rs17182573	0.83[AMR][1000 genomes]
rs17182643	0.88[AMR][1000 genomes]
rs61735822	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61735824	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:33 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1059230	chr21:46956877-47907990	Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	94 gene(s)	inside rSNPs	n/a
2	nsv544491	chr21:46956877-47907990	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	94 gene(s)	inside rSNPs	n/a
3	nsv1058472	chr21:47027823-47797326	Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	n/a
4	nsv544492	chr21:47027823-47797326	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	n/a
5	nsv1065959	chr21:47188878-48091343	Bivalent Enhancer Enhancers Genic enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	102 gene(s)	inside rSNPs	n/a
6	nsv531580	chr21:47221774-48090317	Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	101 gene(s)	inside rSNPs	n/a
7	nsv918103	chr21:47297067-48089510	Genic enhancers Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	99 gene(s)	inside rSNPs	n/a
8	nsv869002	chr21:47297268-47963186	Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	n/a
9	nsv470910	chr21:47353775-48084988	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	n/a
10	nsv1059118	chr21:47398331-48090457	Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	n/a
11	nsv544494	chr21:47398331-48090457	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	n/a
12	nsv934264	chr21:47401083-48090317	Genic enhancers Enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	n/a
13	nsv1060978	chr21:47488073-47833640	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	n/a
14	nsv519904	chr21:47583506-47881309	Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	n/a
15	nsv948761	chr21:47587940-48069930	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	n/a
16	nsv1055239	chr21:47591378-48090317	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	n/a
17	nsv544495	chr21:47591378-48090317	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	n/a
18	nsv933354	chr21:47609029-47851401	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	n/a
19	nsv949706	chr21:47625544-48069930	Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	n/a
20	nsv529496	chr21:47634193-48090317	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	n/a
21	nsv587975	chr21:47661235-47830843	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	n/a
22	nsv432159	chr21:47673247-47854392	Weak transcription Active TSS Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	n/a
23	nsv527355	chr21:47678774-47863025	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	n/a
24	nsv914135	chr21:47681041-47762374	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	n/a
25	nsv914136	chr21:47681041-47900994	Active TSS Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	n/a
26	nsv1064588	chr21:47700051-47788823	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	n/a
27	nsv544496	chr21:47700051-47788823	Active TSS Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	n/a
28	nsv914137	chr21:47700498-47862624	Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	n/a
29	nsv914138	chr21:47700498-47866227	Genic enhancers Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	n/a
30	nsv914139	chr21:47706737-47786494	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	n/a
31	nsv914140	chr21:47712185-47866227	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	n/a
32	nsv914141	chr21:47712412-47757419	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	n/a
33	esv3357725	chr21:47743049-47746097	Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	16 gene(s)	inside rSNPs	n/a

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs59141477	C21orf57	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:47741800-47745800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr21:47741800-47746200	Active TSS	A549	lung
3	chr21:47741800-47746400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr21:47742000-47745800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr21:47742600-47746000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr21:47743600-47746200	Active TSS	Stomach Smooth Muscle	stomach
7	chr21:47744200-47745800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr21:47744600-47745800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
9	chr21:47744800-47745800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr21:47744800-47746200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr21:47745000-47745800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
12	chr21:47745200-47745800	Flanking Active TSS	Adipose Nuclei	Adipose
13	chr21:47745200-47745800	Flanking Active TSS	Fetal Muscle Leg	muscle
14	chr21:47745200-47745800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
15	chr21:47745200-47745800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
16	chr21:47745200-47746000	Flanking Active TSS	HUVEC	blood vessel
17	chr21:47745200-47746200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
18	chr21:47745200-47746200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr21:47745400-47745800	Flanking Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr21:47745400-47745800	Flanking Active TSS	H9 Cell Line	embryonic stem cell
21	chr21:47745400-47745800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr21:47745400-47745800	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
23	chr21:47745400-47745800	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
24	chr21:47745400-47745800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr21:47745400-47745800	Enhancers	Primary B cells from peripheral blood	blood
26	chr21:47745400-47745800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr21:47745400-47745800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
28	chr21:47745400-47745800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
29	chr21:47745400-47745800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr21:47745400-47745800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
31	chr21:47745400-47745800	Flanking Active TSS	Brain Anterior Caudate	brain
32	chr21:47745400-47745800	Flanking Active TSS	Brain Cingulate Gyrus	brain
33	chr21:47745400-47745800	Flanking Active TSS	Brain Hippocampus Middle	brain
34	chr21:47745400-47745800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
35	chr21:47745400-47745800	Flanking Active TSS	Duodenum Mucosa	Duodenum
36	chr21:47745400-47745800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
37	chr21:47745400-47745800	Flanking Active TSS	Fetal Brain Male	brain
38	chr21:47745400-47745800	Flanking Active TSS	Fetal Brain Female	brain
39	chr21:47745400-47745800	Flanking Active TSS	Fetal Kidney	kidney
40	chr21:47745400-47745800	Flanking Active TSS	Fetal Lung	lung
41	chr21:47745400-47745800	Flanking Active TSS	Fetal Stomach	stomach
42	chr21:47745400-47745800	Flanking Active TSS	Pancreas	Pancrea
43	chr21:47745400-47745800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
44	chr21:47745400-47745800	Flanking Active TSS	Rectal Smooth Muscle	rectum
45	chr21:47745400-47745800	Enhancers	Sigmoid Colon	Sigmoid Colon
46	chr21:47745400-47745800	Enhancers	Small Intestine	intestine
47	chr21:47745400-47745800	Flanking Active TSS	Thymus	Thymus
48	chr21:47745400-47745800	Flanking Active TSS	NH-A	brain
49	chr21:47745400-47745800	Flanking Active TSS	Osteobl	bone
50	chr21:47745400-47746000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links