The 2.0 version of rSNPBase

Variant report

Variant rs59188778
Chromosome Location chr5:74109074-74109075
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:74064000-74112400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:74064400-74134600 Weak transcription Fetal Brain Male brain
3 chr5:74066600-74112800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr5:74069000-74153000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:74070000-74111600 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr5:74074800-74143400 Weak transcription Primary B cells from cord blood blood
7 chr5:74087600-74112000 Weak transcription A549 lung
8 chr5:74087600-74130000 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr5:74095800-74146000 Weak transcription Primary hematopoietic stem cells blood
10 chr5:74096000-74112400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr5:74096000-74113400 Weak transcription Brain Angular Gyrus brain
12 chr5:74096000-74131000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr5:74096000-74134200 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr5:74096000-74134200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr5:74096000-74137200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr5:74096000-74137200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr5:74096200-74134200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr5:74096400-74109200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr5:74096400-74111400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr5:74096400-74111400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr5:74096400-74129600 Weak transcription Primary T cells fromperipheralblood blood
22 chr5:74096400-74133800 Weak transcription Fetal Thymus thymus
23 chr5:74097400-74147400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr5:74097800-74114000 Weak transcription H9 Cell Line embryonic stem cell
25 chr5:74098200-74129200 Weak transcription Primary T cells from cord blood blood
26 chr5:74101000-74124000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr5:74101200-74112200 Weak transcription Brain Anterior Caudate brain
28 chr5:74101200-74131600 Weak transcription Dnd41 blood
29 chr5:74101200-74132200 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr5:74101200-74136400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr5:74103400-74111400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr5:74105400-74110600 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr5:74105600-74110600 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr5:74106200-74109600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr5:74106800-74109800 Strong transcription H1 Cell Line embryonic stem cell
36 chr5:74106800-74110800 Strong transcription HUES48 Cell Line embryonic stem cell
37 chr5:74107000-74109800 Strong transcription iPS-18 Cell Line embryonic stem cell
38 chr5:74107000-74111800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr5:74107400-74110800 Strong transcription HepG2 liver
40 chr5:74107400-74112000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr5:74108000-74109800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr5:74108000-74109800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr5:74108000-74111400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr5:74108000-74111800 Weak transcription HMEC breast
45 chr5:74108000-74111800 Weak transcription NHEK skin
46 chr5:74108400-74109800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr5:74108400-74110000 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr5:74108400-74134200 Weak transcription Thymus Thymus
49 chr5:74108600-74109800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr5:74109000-74111600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015