The 2.0 version of rSNPBase

Variant report

Variant rs59210342
Chromosome Location chr2:30732820-30732821
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30721400-30739000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:30724200-30733400 Weak transcription Fetal Intestine Large intestine
3 chr2:30724200-30733800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr2:30724200-30734000 Weak transcription Ovary ovary
5 chr2:30724200-30737400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr2:30724600-30737400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:30726200-30734200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr2:30726200-30742600 Weak transcription Pancreas Pancrea
9 chr2:30726400-30733400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr2:30726400-30733800 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr2:30726400-30734200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr2:30726600-30737000 Weak transcription Stomach Mucosa stomach
13 chr2:30727000-30734400 Weak transcription Psoas Muscle Psoas
14 chr2:30727800-30734000 Weak transcription Right Atrium heart
15 chr2:30727800-30741400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr2:30728000-30739200 Weak transcription Thymus Thymus
17 chr2:30728200-30733400 Weak transcription Fetal Stomach stomach
18 chr2:30728600-30734400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr2:30728800-30733000 Weak transcription Fetal Lung lung
20 chr2:30728800-30733200 Weak transcription NHLF lung
21 chr2:30729000-30733000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr2:30729000-30733200 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr2:30729000-30734000 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr2:30729000-30737600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr2:30729000-30741200 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr2:30729000-30764600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr2:30729800-30736800 Weak transcription Liver Liver
28 chr2:30731600-30734600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr2:30732000-30738400 Enhancers K562 blood
30 chr2:30732000-30739400 Enhancers Fetal Heart heart
31 chr2:30732200-30735000 Enhancers HSMMtube muscle
32 chr2:30732400-30733000 Enhancers Left Ventricle heart
33 chr2:30732400-30733800 Enhancers HepG2 liver
34 chr2:30732400-30735400 Enhancers Skeletal Muscle Male skeletal muscle
35 chr2:30732600-30733000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr2:30732600-30733000 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr2:30732600-30733200 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr2:30732600-30733400 Enhancers A549 lung
39 chr2:30732600-30733600 Enhancers Right Ventricle heart
40 chr2:30732600-30733600 Enhancers Skeletal Muscle Female skeletal muscle
41 chr2:30732800-30733600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr2:30732800-30733600 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr2:30732800-30733800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr2:30732800-30733800 Weak transcription Fetal Muscle Leg muscle
45 chr2:30732800-30734800 Enhancers NHDF-Ad bronchial
46 chr2:30732800-30735000 Enhancers Primary T cells from cord blood blood
47 chr2:30732800-30735400 Enhancers Small Intestine intestine
48 chr2:30732800-30735600 Enhancers Hela-S3 cervix
49 chr2:30732800-30742000 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015