The 2.0 version of rSNPBase

Variant report

Variant rs59255886
Chromosome Location chr3:101184235-101184236
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101141000-101185600 Weak transcription Right Ventricle heart
2 chr3:101146000-101185600 Weak transcription Rectal Smooth Muscle rectum
3 chr3:101160200-101185600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr3:101160200-101210800 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr3:101160600-101185600 Weak transcription Gastric stomach
6 chr3:101161400-101185600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr3:101161400-101196800 Weak transcription Thymus Thymus
8 chr3:101161400-101207600 Weak transcription Aorta Aorta
9 chr3:101164400-101185400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr3:101165400-101185400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr3:101170800-101185600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr3:101171000-101185600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr3:101171200-101185200 Weak transcription Fetal Heart heart
14 chr3:101171200-101230400 Weak transcription Brain Substantia Nigra brain
15 chr3:101171400-101193400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr3:101171400-101207800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr3:101174000-101202000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr3:101174600-101185000 Weak transcription Brain Cingulate Gyrus brain
19 chr3:101174600-101211000 Weak transcription Duodenum Mucosa Duodenum
20 chr3:101176000-101211200 Weak transcription Muscle Satellite Cultured Cells --
21 chr3:101176600-101185400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr3:101176600-101185600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:101176600-101211600 Weak transcription HSMM muscle
24 chr3:101176800-101185600 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr3:101176800-101193400 Weak transcription Fetal Muscle Trunk muscle
26 chr3:101176800-101203200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr3:101176800-101211200 Weak transcription Stomach Smooth Muscle stomach
28 chr3:101176800-101211400 Weak transcription Colon Smooth Muscle Colon
29 chr3:101177000-101185400 Weak transcription Left Ventricle heart
30 chr3:101177000-101185600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr3:101177600-101185600 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr3:101177600-101191600 Weak transcription Primary B cells from cord blood blood
33 chr3:101177600-101194200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr3:101177600-101210800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr3:101177800-101184800 Weak transcription Liver Liver
36 chr3:101177800-101185000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr3:101177800-101185600 Weak transcription Fetal Thymus thymus
38 chr3:101177800-101193200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr3:101177800-101194200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr3:101177800-101202000 Weak transcription Dnd41 blood
41 chr3:101177800-101202800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr3:101178000-101185400 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr3:101178000-101192200 Weak transcription Primary B cells from peripheral blood blood
44 chr3:101178200-101193400 Weak transcription Fetal Lung lung
45 chr3:101178200-101207000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr3:101179600-101185600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr3:101180800-101185400 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr3:101181000-101193400 Weak transcription Primary hematopoietic stem cells blood
49 chr3:101181200-101185600 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr3:101182600-101185600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015