Variant report

Variant	rs59279779
Chromosome Location	chr10:118353498-118353499
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73380185	1.00[AMR][1000 genomes]
rs73383711	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3415357	chr10:118254861-118383651	Weak transcription Active TSS Genic enhancers Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118350400-118354200	Active TSS	Pancreas	Pancrea
2	chr10:118351200-118355600	Weak transcription	Fetal Intestine Small	intestine
3	chr10:118351600-118368000	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr10:118351800-118355800	Weak transcription	Fetal Intestine Large	intestine
5	chr10:118351800-118366000	Weak transcription	Duodenum Mucosa	Duodenum
6	chr10:118351800-118368600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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