The 2.0 version of rSNPBase

Variant report

Variant rs59294983
Chromosome Location chr2:98363155-98363156
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:98345000-98366400 Weak transcription Duodenum Mucosa Duodenum
2 chr2:98348200-98372400 Weak transcription Esophagus oesophagus
3 chr2:98348800-98364600 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr2:98352200-98398800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr2:98354400-98368200 Weak transcription Colonic Mucosa Colon
6 chr2:98355000-98373200 Weak transcription Gastric stomach
7 chr2:98357000-98365400 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr2:98357200-98367400 Weak transcription Brain Substantia Nigra brain
9 chr2:98357400-98366000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:98357400-98368000 Weak transcription Lung lung
11 chr2:98357400-98368600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr2:98357400-98371400 Weak transcription Dnd41 blood
13 chr2:98357400-98372000 Weak transcription Pancreas Pancrea
14 chr2:98357600-98363200 Enhancers Hela-S3 cervix
15 chr2:98357600-98364600 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr2:98357600-98365800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr2:98358600-98372000 Weak transcription Brain Germinal Matrix brain
18 chr2:98358800-98371600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr2:98359000-98363600 Enhancers Primary T helper cells fromperipheralblood blood
20 chr2:98359000-98363800 Weak transcription Fetal Brain Female brain
21 chr2:98359000-98365000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:98359000-98366600 Weak transcription Liver Liver
23 chr2:98359000-98368400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:98359000-98368400 Weak transcription NHLF lung
25 chr2:98359200-98363400 Weak transcription Fetal Heart heart
26 chr2:98359200-98364000 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr2:98359200-98364000 Weak transcription Muscle Satellite Cultured Cells --
28 chr2:98359200-98364800 Weak transcription Fetal Thymus thymus
29 chr2:98359200-98365000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr2:98359200-98365000 Weak transcription Thymus Thymus
31 chr2:98359200-98365000 Weak transcription Spleen Spleen
32 chr2:98359200-98368000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr2:98359200-98368000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr2:98359200-98368600 Weak transcription NH-A brain
35 chr2:98359200-98368600 Weak transcription Osteobl bone
36 chr2:98359200-98371000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr2:98359200-98371200 Weak transcription Small Intestine intestine
38 chr2:98359200-98371800 Weak transcription Right Ventricle heart
39 chr2:98359200-98382400 Weak transcription Psoas Muscle Psoas
40 chr2:98359400-98365200 Weak transcription Primary monocytes fromperipheralblood blood
41 chr2:98359600-98363800 Weak transcription Left Ventricle heart
42 chr2:98359600-98365400 Enhancers Primary T cells fromperipheralblood blood
43 chr2:98359600-98365400 Enhancers Primary T killer memory cells from peripheral blood blood
44 chr2:98359600-98367600 Weak transcription HMEC breast
45 chr2:98359600-98368000 Weak transcription Right Atrium heart
46 chr2:98359600-98371000 Weak transcription Brain Angular Gyrus brain
47 chr2:98359600-98371000 Weak transcription Brain Cingulate Gyrus brain
48 chr2:98360200-98365200 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr2:98360200-98371200 Weak transcription Brain Inferior Temporal Lobe brain
50 chr2:98360400-98365000 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015