The 2.0 version of rSNPBase

Variant report

Variant rs59341821
Chromosome Location chr7:39744950-39744951
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39715200-39749400 Weak transcription Aorta Aorta
2 chr7:39727400-39747800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr7:39730600-39749200 Weak transcription Ovary ovary
4 chr7:39732000-39748000 Strong transcription HUVEC blood vessel
5 chr7:39732000-39749200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr7:39734200-39746200 Weak transcription Fetal Kidney kidney
7 chr7:39736600-39749400 Weak transcription Fetal Heart heart
8 chr7:39737400-39749800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr7:39737600-39748800 Weak transcription Colon Smooth Muscle Colon
10 chr7:39737800-39749400 Weak transcription Brain Cingulate Gyrus brain
11 chr7:39737800-39749400 Weak transcription Psoas Muscle Psoas
12 chr7:39738000-39748600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr7:39738000-39749200 Weak transcription Fetal Brain Female brain
14 chr7:39738000-39749400 Weak transcription Placenta Placenta
15 chr7:39738400-39748400 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr7:39738600-39748800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr7:39738600-39748800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr7:39738600-39749200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr7:39739600-39749600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr7:39740200-39746200 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr7:39740200-39747200 Weak transcription Gastric stomach
22 chr7:39740200-39748000 Weak transcription Primary B cells from peripheral blood blood
23 chr7:39740200-39749200 Weak transcription Rectal Smooth Muscle rectum
24 chr7:39740200-39749400 Weak transcription Pancreas Pancrea
25 chr7:39740200-39749400 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr7:39740200-39749600 Weak transcription Lung lung
27 chr7:39740200-39752000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr7:39740400-39745000 Weak transcription H9 Cell Line embryonic stem cell
29 chr7:39740400-39745600 Weak transcription Esophagus oesophagus
30 chr7:39740400-39747400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr7:39740400-39749000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr7:39740400-39749600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr7:39740600-39748200 Weak transcription Brain Anterior Caudate brain
34 chr7:39740600-39749400 Weak transcription H1 Cell Line embryonic stem cell
35 chr7:39740600-39749400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr7:39740800-39745800 Weak transcription Liver Liver
37 chr7:39740800-39746000 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr7:39740800-39746000 Weak transcription Left Ventricle heart
39 chr7:39740800-39746000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr7:39740800-39747800 Weak transcription Right Ventricle heart
41 chr7:39740800-39748600 Weak transcription Fetal Thymus thymus
42 chr7:39740800-39749000 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr7:39740800-39749200 Weak transcription Brain Germinal Matrix brain
44 chr7:39740800-39749200 Weak transcription GM12878-XiMat blood
45 chr7:39740800-39749200 Weak transcription NHLF lung
46 chr7:39740800-39749400 Weak transcription Thymus Thymus
47 chr7:39741000-39746000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr7:39741000-39746000 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr7:39741000-39748600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr7:39741000-39749200 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015