Variant report

Variant	rs59386661
Chromosome Location	chr6:5788345-5788346
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1206675	0.94[EUR][1000 genomes]
rs17133302	0.83[EUR][1000 genomes]
rs17145857	0.94[EUR][1000 genomes]
rs1815272	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9504515	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv970669	chr6:5783028-5791204	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv981101	chr6:5787642-5788880	Enhancers Weak transcription Bivalent Enhancer	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:5783800-5794600	Weak transcription	Psoas Muscle	Psoas
2	chr6:5787000-5789200	Enhancers	Fetal Muscle Leg	muscle
3	chr6:5787400-5793000	Weak transcription	Fetal Brain Female	brain
4	chr6:5787800-5791600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr6:5787800-5803800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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