Variant report

Variant	rs59391666
Chromosome Location	chr4:1339774-1339775
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CHD2	chr4:1339740-1341572	GM12878	blood:	n/a	chr4:1340991-1341001 chr4:1340986-1340996
2	POLR2A	chr4:1339585-1341618	H1-neurons	neurons:	n/a	n/a
3	MYC	chr4:1339771-1340035	K562	blood:	n/a	n/a
4	POLR2A	chr4:1339619-1341579	H1-neurons	neurons:	n/a	n/a
5	ZBTB7A	chr4:1339675-1339828	HepG2	liver:	n/a	n/a
6	RUNX3	chr4:1339582-1340011	GM12878	blood:	n/a	n/a
7	TAF1	chr4:1339668-1339944	H1-hESC	embryonic stem cell:	n/a	n/a
8	ZBTB7A	chr4:1339579-1341606	ECC-1	luminal epithelium:	n/a	chr4:1341045-1341056 chr4:1340984-1340991
9	TCF12	chr4:1339625-1341010	ECC-1	luminal epithelium:	n/a	n/a
10	EP300	chr4:1339730-1339930	K562	blood:	n/a	n/a
11	RAD21	chr4:1339743-1339988	IMR90	lung:	n/a	n/a
12	CTCF	chr4:1339760-1339910	GM12868	blood:	n/a	n/a
13	POLR2A	chr4:1339722-1341793	HUVEC	blood vessel:	n/a	n/a
14	POLR2A	chr4:1339550-1339967	HepG2	liver:	n/a	n/a
15	PAX5	chr4:1339618-1339919	GM12878	blood:	n/a	n/a
16	MXI1	chr4:1339626-1341709	HepG2	liver:	n/a	n/a
17	CTCF	chr4:1339760-1339910	HBMEC	blood vessel:	n/a	n/a
18	HMGN3	chr4:1339728-1341417	K562	blood:	n/a	n/a
19	TBL1XR1	chr4:1339710-1340207	K562	blood:	n/a	n/a
20	TBP	chr4:1339767-1339984	HepG2	liver:	n/a	n/a
21	MBD4	chr4:1339612-1339889	HepG2	liver:	n/a	n/a
22	RAD21	chr4:1339707-1339936	SK-N-SH_RA	brain:	n/a	n/a
23	YY1	chr4:1339767-1339931	K562	blood:	n/a	n/a
24	ZNF143	chr4:1339705-1340083	GM12878	blood:	n/a	chr4:1339907-1339917
25	RAD21	chr4:1339708-1339975	H1-hESC	embryonic stem cell:	n/a	n/a
26	POLR2A	chr4:1339688-1341666	ECC-1	luminal epithelium:	n/a	n/a
27	CHD2	chr4:1339747-1339887	Hela-S3	cervix:	n/a	n/a
28	RCOR1	chr4:1339700-1339950	Hela-S3	cervix:	n/a	n/a
29	MXI1	chr4:1339461-1341919	IMR90	lung:	n/a	n/a
30	MAX	chr4:1339590-1341748	A549	lung:	n/a	chr4:1340648-1340658 chr4:1341316-1341326 chr4:1340801-1340816 chr4:1340802-1340813 chr4:1340802-1340812 chr4:1340803-1340812 chr4:1340802-1340813
31	ZNF143	chr4:1339770-1339954	K562	blood:	n/a	chr4:1339907-1339917
32	HCFC1	chr4:1339473-1341818	Hela-S3	cervix:	n/a	n/a
33	JUND	chr4:1339737-1339929	K562	blood:	n/a	n/a
34	MXI1	chr4:1339653-1341739	GM12878	blood:	n/a	n/a
35	MAZ	chr4:1339659-1341710	K562	blood:	n/a	chr4:1340648-1340658 chr4:1341316-1341326 chr4:1340801-1340816 chr4:1340802-1340813 chr4:1340802-1340812 chr4:1340803-1340812 chr4:1340802-1340813
36	MTA3	chr4:1339549-1340516	GM12878	blood:	n/a	n/a
37	SMC3	chr4:1339671-1340092	GM12878	blood:	n/a	n/a
38	POLR2A	chr4:1339571-1341708	SK-N-MC	brain:	n/a	n/a
39	MAX	chr4:1339705-1341780	K562	blood:	n/a	chr4:1340648-1340658 chr4:1341316-1341326 chr4:1340801-1340816 chr4:1340802-1340813 chr4:1340802-1340812 chr4:1340803-1340812 chr4:1340802-1340813
40	CTCF	chr4:1339764-1339992	GM12878	blood:	n/a	n/a
41	MYC	chr4:1339605-1341754	NB4	blood:	n/a	chr4:1340648-1340658 chr4:1341316-1341326 chr4:1340801-1340816 chr4:1340802-1340813 chr4:1340802-1340812 chr4:1340803-1340812 chr4:1340802-1340813
42	ELF1	chr4:1339661-1341699	GM12878	blood:	n/a	chr4:1340140-1340152 chr4:1340399-1340411 chr4:1341037-1341046
43	CTCF	chr4:1339746-1339962	GM12891	blood:	n/a	n/a
44	RAD21	chr4:1339668-1340041	GM12878	blood:	n/a	n/a
45	CTCF	chr4:1339760-1339910	NB4	blood:	n/a	n/a
46	RAD21	chr4:1339690-1339988	H1-hESC	embryonic stem cell:	n/a	n/a
47	ZNF384	chr4:1339388-1339991	GM12878	blood:	n/a	n/a
48	CTCF	chr4:1339740-1339890	GM12865	blood:	n/a	n/a
49	POLR2A	chr4:1339753-1339923	A549	lung:	n/a	n/a
50	JUN	chr4:1339390-1341877	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:1295898..1297425-chr4:1338423..1340843,2	MCF-7	breast:
2	chr4:1338699..1344021-chr4:1351274..1357737,7	MCF-7	breast:
3	chr4:1339666..1341352-chr4:1711949..1713755,2	K562	blood:
4	chr4:1236808..1249320-chr4:1336333..1343819,66	MCF-7	breast:
5	chr4:1338673..1343611-chr4:1344125..1350325,16	MCF-7	breast:
6	chr4:1282437..1287650-chr4:1338224..1344043,13	MCF-7	breast:
7	chr4:1292718..1295595-chr4:1336898..1340190,3	MCF-7	breast:
8	chr4:1323033..1328941-chr4:1337055..1342245,8	MCF-7	breast:
9	chr4:1339011..1342367-chr4:1367715..1370691,3	MCF-7	breast:
10	chr4:1280807..1287593-chr4:1339102..1342185,6	K562	blood:
11	chr4:679728..681770-chr4:1339441..1342302,2	K562	blood:
12	chr4:1336558..1338149-chr4:1338227..1340765,3	MCF-7	breast:
13	chr4:1280840..1286312-chr4:1338111..1343712,9	K562	blood:
14	chr4:1240883..1245378-chr4:1339091..1342291,13	K562	blood:
15	chr4:1339117..1341001-chr4:1581105..1584040,2	K562	blood:
16	chr4:1235141..1249133-chr4:1336906..1347308,118	MCF-7	breast:
17	chr4:1339048..1342461-chr4:1794240..1796574,3	MCF-7	breast:
18	chr4:1280977..1287340-chr4:1335495..1344055,33	MCF-7	breast:
19	chr4:1313002..1315500-chr4:1338426..1340938,2	MCF-7	breast:
20	chr4:1339661..1343694-chr4:1344237..1349254,11	K562	blood:
21	chr4:1188846..1191354-chr4:1337880..1340557,2	MCF-7	breast:
22	chr4:984860..987749-chr4:1337412..1341360,3	MCF-7	breast:
23	chr4:1339729..1343240-chr4:1359477..1362445,4	MCF-7	breast:
24	chr4:1239502..1245378-chr4:1336996..1344860,21	K562	blood:
25	chr4:1289122..1291329-chr4:1338444..1340407,2	MCF-7	breast:

Variant related genes	Relation type
UVSSA	TF binding region
ENSG00000196810	Chromatin interaction
ENSG00000145217	Chromatin interaction
ENSG00000163945	Chromatin interaction
ENSG00000159692	Chromatin interaction
ENSG00000159674	Chromatin interaction
ENSG00000090316	Chromatin interaction
ENSG00000163950	Chromatin interaction
ENSG00000127415	Chromatin interaction
ENSG00000244459	Chromatin interaction
ENSG00000253399	Chromatin interaction
ENSG00000068078	Chromatin interaction
ENSG00000169026	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv3339080	chr4:970630-1546223	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
4	nsv878328	chr4:1141573-1990425	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
5	nsv878330	chr4:1147407-1523930	Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
6	nsv461152	chr4:1159680-1415698	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
7	nsv593278	chr4:1159680-1415698	Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
8	nsv997971	chr4:1191256-1518521	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
9	nsv461155	chr4:1203265-1352685	Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
10	nsv593281	chr4:1203265-1352685	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
11	nsv593298	chr4:1244267-1342521	Flanking Active TSS Strong transcription Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
12	nsv878338	chr4:1277826-1358449	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
13	nsv878339	chr4:1277826-1363886	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
14	nsv878340	chr4:1277826-1386570	Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
15	nsv878341	chr4:1277826-1391400	Active TSS ZNF genes & repeats Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
16	nsv1002635	chr4:1282603-1402761	Genic enhancers Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
17	nsv878342	chr4:1291337-1363886	Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
18	nsv878343	chr4:1291337-1391400	Weak transcription Genic enhancers Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
19	nsv878344	chr4:1291337-1414684	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
20	nsv878345	chr4:1291337-1563920	Strong transcription Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	nsv461157	chr4:1300077-1352685	Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
22	nsv593301	chr4:1300077-1352685	Strong transcription Weak transcription Active TSS Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
23	nsv878346	chr4:1300077-1363886	Genic enhancers Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
24	nsv878347	chr4:1300077-1866358	Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Active TSS Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
25	nsv878348	chr4:1305269-1386570	Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
26	esv1794294	chr4:1307119-1817474	Bivalent/Poised TSS Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
27	nsv878349	chr4:1318132-1363886	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
28	nsv878350	chr4:1320023-1500753	Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent/Poised TSS Genic enhancers Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
29	nsv932661	chr4:1324751-1364014	Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
30	nsv878351	chr4:1329847-1414684	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
31	nsv878352	chr4:1334721-1363886	Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
32	nsv1008785	chr4:1335089-1518521	Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
33	nsv536988	chr4:1335089-1518521	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
34	nsv593302	chr4:1338618-1414684	ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
35	esv3345580	chr4:1339177-1341725	Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:1338800-1342400	Active TSS	iPS-15b Cell Line	embryonic stem cell
2	chr4:1339000-1340000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr4:1339000-1341600	Active TSS	Osteobl	bone
4	chr4:1339000-1341800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr4:1339000-1342000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr4:1339000-1342000	Active TSS	HSMM	muscle
7	chr4:1339200-1339800	Active TSS	Brain Germinal Matrix	brain
8	chr4:1339200-1339800	Flanking Active TSS	Fetal Brain Female	brain
9	chr4:1339200-1340000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr4:1339200-1340000	Flanking Active TSS	Fetal Lung	lung
11	chr4:1339200-1341400	Active TSS	HMEC	breast
12	chr4:1339200-1341400	Active TSS	NH-A	brain
13	chr4:1339200-1341600	Active TSS	Muscle Satellite Cultured Cells	--
14	chr4:1339200-1342000	Active TSS	Breast Myoepithelial Primary Cells	Breast
15	chr4:1339400-1339800	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr4:1339400-1339800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr4:1339400-1339800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr4:1339400-1339800	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr4:1339400-1339800	Flanking Active TSS	Primary hematopoietic stem cells	blood
20	chr4:1339400-1339800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
21	chr4:1339400-1339800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
22	chr4:1339400-1339800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
23	chr4:1339400-1339800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr4:1339400-1339800	Flanking Active TSS	Brain Angular Gyrus	brain
25	chr4:1339400-1339800	Flanking Active TSS	Brain Substantia Nigra	brain
26	chr4:1339400-1339800	Flanking Active TSS	Fetal Muscle Trunk	muscle
27	chr4:1339400-1339800	Flanking Active TSS	Fetal Muscle Leg	muscle
28	chr4:1339400-1339800	Flanking Active TSS	Fetal Stomach	stomach
29	chr4:1339400-1339800	Enhancers	Spleen	Spleen
30	chr4:1339400-1339800	Flanking Active TSS	Dnd41	blood
31	chr4:1339400-1339800	Flanking Active TSS	GM12878-XiMat	blood
32	chr4:1339400-1339800	Flanking Active TSS	Hela-S3	cervix
33	chr4:1339400-1339800	Flanking Active TSS	HUVEC	blood vessel
34	chr4:1339400-1339800	Flanking Active TSS	K562	blood
35	chr4:1339400-1340000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
36	chr4:1339400-1340000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
37	chr4:1339400-1340000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
38	chr4:1339400-1340000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
39	chr4:1339400-1340000	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
40	chr4:1339400-1340000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
41	chr4:1339400-1340000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
42	chr4:1339400-1340000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr4:1339400-1340000	Flanking Active TSS	Adipose Nuclei	Adipose
44	chr4:1339400-1340000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
45	chr4:1339400-1340000	Flanking Active TSS	Duodenum Mucosa	Duodenum
46	chr4:1339400-1340000	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
47	chr4:1339400-1340000	Flanking Active TSS	Placenta	Placenta
48	chr4:1339400-1340000	Flanking Active TSS	Fetal Thymus	thymus
49	chr4:1339400-1340000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
50	chr4:1339400-1340000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links