Variant report

Variant	rs59397035
Chromosome Location	chr8:119622950-119622951
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:119617998..119620916-chr8:119621606..119623559,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1521154	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6469760	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs67324271	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7006088	0.80[ASN][1000 genomes]
rs7015536	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7016256	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72678183	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891413	chr8:119607281-119679668	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119605800-119631800	Weak transcription	Fetal Intestine Small	intestine
2	chr8:119609200-119633000	Weak transcription	Gastric	stomach
3	chr8:119609400-119633600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:119610400-119626600	Weak transcription	Brain Anterior Caudate	brain
5	chr8:119614600-119626600	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr8:119619400-119632200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr8:119620600-119626600	Weak transcription	Left Ventricle	heart
8	chr8:119621600-119623200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr8:119621600-119623800	Enhancers	Fetal Lung	lung
10	chr8:119622200-119623000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
11	chr8:119622200-119626400	Weak transcription	Brain Substantia Nigra	brain
12	chr8:119622200-119626600	Weak transcription	Lung	lung
13	chr8:119622200-119626600	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr8:119622200-119626800	Weak transcription	Brain Hippocampus Middle	brain
15	chr8:119622400-119623400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr8:119622400-119626400	Weak transcription	Brain Angular Gyrus	brain
17	chr8:119622400-119627000	Weak transcription	NHEK	skin
18	chr8:119622600-119623000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr8:119622600-119623200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr8:119622600-119623200	Enhancers	Pancreatic Islets	Pancreatic Islet
21	chr8:119622600-119624400	Enhancers	Stomach Mucosa	stomach
22	chr8:119622800-119623000	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr8:119622800-119623000	Flanking Active TSS	Liver	Liver
24	chr8:119622800-119623000	Enhancers	Brain Cingulate Gyrus	brain
25	chr8:119622800-119626400	Weak transcription	Right Atrium	heart
26	chr8:119622800-119626800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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