Variant report
| Variant | rs5941044 |
|---|---|
| Chromosome Location | chrX:91426859-91426860 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:25)
| rs_ID | r2[population] |
|---|---|
| rs118217 | 1.00[CHB][hapmap] |
| rs118218 | 1.00[CHB][hapmap] |
| rs2025088 | 1.00[CHB][hapmap];1.00[YRI][hapmap] |
| rs2025090 | 1.00[CHB][hapmap];1.00[YRI][hapmap] |
| rs373438 | 1.00[CHB][hapmap] |
| rs382841 | 1.00[CHB][hapmap] |
| rs393785 | 1.00[CHB][hapmap] |
| rs410882 | 1.00[CHB][hapmap] |
| rs4141535 | 1.00[CHB][hapmap] |
| rs4279764 | 1.00[CHB][hapmap] |
| rs4281262 | 1.00[CHB][hapmap] |
| rs435669 | 1.00[CHB][hapmap] |
| rs443810 | 1.00[CHB][hapmap] |
| rs4893173 | 1.00[CHB][hapmap] |
| rs5941045 | 1.00[CHB][hapmap];1.00[YRI][hapmap] |
| rs5942137 | 1.00[CHB][hapmap];1.00[YRI][hapmap] |
| rs5942141 | 1.00[CHB][hapmap];1.00[YRI][hapmap] |
| rs5942153 | 1.00[CHB][hapmap] |
| rs5942183 | 1.00[CHB][hapmap] |
| rs5942186 | 1.00[CHB][hapmap] |
| rs5984905 | 1.00[CHB][hapmap] |
| rs5984912 | 1.00[CHB][hapmap] |
| rs6418101 | 1.00[CHB][hapmap] |
| rs6652624 | 1.00[CHB][hapmap] |
| rs6652630 | 1.00[CHB][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv432350 | chrX:91158935-91590765 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
