The 2.0 version of rSNPBase

Variant report

Variant rs59424499
Chromosome Location chr6:30122433-30122434
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30118600-30125000 Enhancers Fetal Intestine Large intestine
2 chr6:30119600-30124000 Weak transcription Right Atrium heart
3 chr6:30120600-30123800 Weak transcription K562 blood
4 chr6:30121000-30122800 Enhancers Small Intestine intestine
5 chr6:30121000-30128200 Weak transcription Lung lung
6 chr6:30121600-30122800 Enhancers Sigmoid Colon Sigmoid Colon
7 chr6:30121600-30123600 Weak transcription Primary monocytes fromperipheralblood blood
8 chr6:30121600-30125600 Weak transcription Primary hematopoietic stem cells blood
9 chr6:30121800-30122600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr6:30121800-30122800 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr6:30121800-30123600 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr6:30121800-30124000 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr6:30121800-30125000 Enhancers HMEC breast
14 chr6:30122000-30123600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr6:30122000-30123600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr6:30122000-30123800 Enhancers NH-A brain
17 chr6:30122000-30124800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:30122000-30124800 Enhancers A549 lung
19 chr6:30122000-30125000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:30122200-30122600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
21 chr6:30122200-30123000 Flanking Active TSS Duodenum Mucosa Duodenum
22 chr6:30122200-30123200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:30122200-30123200 Flanking Active TSS Hela-S3 cervix
24 chr6:30122200-30123400 Enhancers HSMMtube muscle
25 chr6:30122200-30124800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr6:30122200-30125000 Enhancers Liver Liver
27 chr6:30122200-30125000 Enhancers NHEK skin
28 chr6:30122200-30128200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr6:30122400-30122600 Flanking Active TSS Colonic Mucosa Colon
30 chr6:30122400-30122600 Flanking Active TSS Fetal Intestine Small intestine
31 chr6:30122400-30122600 Bivalent Enhancer Fetal Muscle Leg muscle
32 chr6:30122400-30122600 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
33 chr6:30122400-30122600 Flanking Active TSS NHDF-Ad bronchial
34 chr6:30122400-30122600 Flanking Active TSS Osteobl bone
35 chr6:30122400-30123000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:30122400-30123000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
37 chr6:30122400-30123000 Bivalent Enhancer Adipose Nuclei Adipose
38 chr6:30122400-30123200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr6:30122400-30123200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
40 chr6:30122400-30123200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
41 chr6:30122400-30123200 Flanking Active TSS HepG2 liver
42 chr6:30122400-30123400 Enhancers HSMM muscle
43 chr6:30122400-30124400 Enhancers Muscle Satellite Cultured Cells --
44 chr6:30122400-30124400 Enhancers NHLF lung
45 chr6:30122400-30124600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:30122400-30125800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015