The 2.0 version of rSNPBase

Variant report

Variant rs59569527
Chromosome Location chr1:175147497-175147498
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175126800-175148800 Strong transcription Primary monocytes fromperipheralblood blood
2 chr1:175127000-175148400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:175127200-175147800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:175127400-175149400 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:175129200-175159600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:175130200-175152600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:175135000-175152600 Weak transcription Aorta Aorta
8 chr1:175135000-175158400 Weak transcription Rectal Smooth Muscle rectum
9 chr1:175136000-175151600 Weak transcription Fetal Stomach stomach
10 chr1:175136000-175157600 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr1:175138000-175148000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:175139400-175148400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:175140200-175147800 Strong transcription Liver Liver
14 chr1:175140800-175148200 Weak transcription Esophagus oesophagus
15 chr1:175140800-175149200 Weak transcription Small Intestine intestine
16 chr1:175141000-175160200 Weak transcription HUVEC blood vessel
17 chr1:175141400-175158400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:175141600-175147800 Strong transcription Adipose Nuclei Adipose
19 chr1:175141600-175149200 Strong transcription Primary T cells from cord blood blood
20 chr1:175142800-175149000 Weak transcription Psoas Muscle Psoas
21 chr1:175143000-175160800 Weak transcription Fetal Muscle Trunk muscle
22 chr1:175143600-175158000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr1:175144000-175151000 Weak transcription K562 blood
24 chr1:175144200-175147800 Strong transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:175144200-175148600 Strong transcription Primary B cells from cord blood blood
26 chr1:175144400-175148800 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:175144800-175147800 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr1:175145000-175148400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:175145400-175148000 Strong transcription Primary hematopoietic stem cells blood
30 chr1:175145400-175148000 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr1:175145400-175148000 Strong transcription Thymus Thymus
32 chr1:175145400-175148200 Strong transcription Left Ventricle heart
33 chr1:175145400-175148400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
34 chr1:175145400-175148400 Strong transcription Sigmoid Colon Sigmoid Colon
35 chr1:175145400-175148600 Strong transcription Fetal Intestine Small intestine
36 chr1:175145400-175149600 Genic enhancers HMEC breast
37 chr1:175145600-175148200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:175145800-175148800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:175145800-175152600 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr1:175146000-175147600 Strong transcription Colonic Mucosa Colon
41 chr1:175146000-175148600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:175146000-175148600 Genic enhancers Pancreas Pancrea
43 chr1:175146000-175157800 Genic enhancers Primary B cells from peripheral blood blood
44 chr1:175146200-175148400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:175146200-175149200 Weak transcription Hela-S3 cervix
46 chr1:175146200-175159400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:175146200-175159800 Weak transcription Stomach Smooth Muscle stomach
48 chr1:175146400-175147600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:175146400-175148400 Genic enhancers Primary T helper cells fromperipheralblood blood
50 chr1:175146600-175148800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015