The 2.0 version of rSNPBase

Variant report

Variant rs59610674
Chromosome Location chr1:79126727-79126728
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:79116000-79128600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:79116400-79127200 Weak transcription Fetal Intestine Large intestine
3 chr1:79116400-79129000 Weak transcription Placenta Placenta
4 chr1:79116400-79130000 Weak transcription Stomach Mucosa stomach
5 chr1:79117000-79132800 Weak transcription Fetal Brain Male brain
6 chr1:79117400-79126800 Weak transcription Fetal Muscle Trunk muscle
7 chr1:79117400-79128400 Weak transcription HSMMtube muscle
8 chr1:79117400-79129800 Weak transcription NHLF lung
9 chr1:79117400-79130400 Weak transcription Pancreas Pancrea
10 chr1:79117400-79130600 Weak transcription Hela-S3 cervix
11 chr1:79117400-79131200 Weak transcription HSMM muscle
12 chr1:79117400-79144000 Weak transcription Esophagus oesophagus
13 chr1:79117400-79144000 Weak transcription Spleen Spleen
14 chr1:79117600-79127000 Weak transcription Brain Substantia Nigra brain
15 chr1:79117600-79129000 Weak transcription Colon Smooth Muscle Colon
16 chr1:79117600-79129400 Weak transcription NH-A brain
17 chr1:79117600-79153000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:79117800-79130200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:79118200-79127400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:79118400-79127000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:79118400-79127200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:79118400-79128600 Weak transcription Thymus Thymus
23 chr1:79118400-79130800 Weak transcription Rectal Smooth Muscle rectum
24 chr1:79118400-79130800 Weak transcription Small Intestine intestine
25 chr1:79118600-79130800 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:79119200-79129400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:79119200-79130800 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr1:79119400-79129400 Weak transcription Brain Germinal Matrix brain
29 chr1:79119400-79129600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:79119400-79130400 Strong transcription Primary monocytes fromperipheralblood blood
31 chr1:79119800-79128400 Weak transcription Brain Hippocampus Middle brain
32 chr1:79119800-79130000 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr1:79119800-79130800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:79119800-79130800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:79119800-79132600 Weak transcription Right Ventricle heart
36 chr1:79120000-79129400 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr1:79120400-79130200 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr1:79120600-79129200 Strong transcription Fetal Lung lung
39 chr1:79120600-79129400 Strong transcription Primary T cells fromperipheralblood blood
40 chr1:79120600-79130000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:79120600-79130200 Strong transcription Liver Liver
42 chr1:79120800-79130200 Strong transcription Dnd41 blood
43 chr1:79121000-79129600 Weak transcription Psoas Muscle Psoas
44 chr1:79121200-79127800 Weak transcription Left Ventricle heart
45 chr1:79121600-79130000 Weak transcription Fetal Stomach stomach
46 chr1:79122000-79126800 Weak transcription Lung lung
47 chr1:79123200-79129200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
48 chr1:79124200-79127600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr1:79124200-79129400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:79124400-79128600 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015