Variant report

Variant	rs59612735
Chromosome Location	chr7:136638096-136638097
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs56243015	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73727441	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73727442	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831147	chr7:136583444-136755741	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2753059	chr7:136633745-136893745	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136623400-136641600	Weak transcription	Right Ventricle	heart
2	chr7:136623600-136641600	Weak transcription	Left Ventricle	heart
3	chr7:136633800-136641400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr7:136634000-136638400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr7:136635600-136641400	Weak transcription	Stomach Smooth Muscle	stomach
6	chr7:136636200-136638200	Weak transcription	Rectal Smooth Muscle	rectum
7	chr7:136637000-136638400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr7:136637200-136638200	Weak transcription	Colon Smooth Muscle	Colon
9	chr7:136637200-136639800	Weak transcription	Fetal Heart	heart
10	chr7:136638000-136638800	Enhancers	NH-A	brain
11	chr7:136638000-136638800	Enhancers	Osteobl	bone
12	chr7:136638000-136639000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr7:136638000-136639000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr7:136638000-136639000	Enhancers	NHLF	lung
15	chr7:136638000-136641200	Enhancers	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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