Variant report

Variant	rs59645085
Chromosome Location	chr8:79144015-79144016
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73686972	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831364	chr8:79034769-79223319	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891055	chr8:79110386-79256864	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv831365	chr8:79128833-79281645	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:79141200-79145400	Enhancers	Colon Smooth Muscle	Colon
2	chr8:79141400-79144200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr8:79141600-79145000	Enhancers	Fetal Lung	lung
4	chr8:79141800-79144600	Enhancers	Muscle Satellite Cultured Cells	--
5	chr8:79142000-79144400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:79142200-79144600	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr8:79142600-79144600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr8:79142600-79145000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:79143200-79144200	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr8:79143200-79144400	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr8:79143200-79144400	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr8:79143200-79144600	Enhancers	Fetal Stomach	stomach
13	chr8:79143200-79145000	Enhancers	Fetal Brain Male	brain
14	chr8:79143200-79145400	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr8:79143400-79144400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr8:79143400-79144400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr8:79143400-79144600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr8:79143400-79144600	Enhancers	Adipose Nuclei	Adipose
19	chr8:79143400-79144600	Enhancers	Fetal Muscle Leg	muscle
20	chr8:79143400-79144600	Enhancers	Rectal Smooth Muscle	rectum
21	chr8:79143400-79145200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr8:79143400-79145200	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr8:79143400-79145400	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr8:79143400-79145400	Enhancers	iPS-15b Cell Line	embryonic stem cell
25	chr8:79143600-79144400	Enhancers	H1 Cell Line	embryonic stem cell
26	chr8:79143600-79144400	Enhancers	Primary hematopoietic stem cells	blood
27	chr8:79143600-79144400	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr8:79143600-79144400	Enhancers	HSMM	muscle
29	chr8:79143800-79144200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr8:79143800-79144400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr8:79143800-79144400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
32	chr8:79143800-79145000	Flanking Active TSS	Osteobl	bone
33	chr8:79144000-79144200	Enhancers	Brain Anterior Caudate	brain
34	chr8:79144000-79144400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr8:79144000-79144400	Enhancers	Brain Germinal Matrix	brain

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