Variant report

Variant rs59690640
Chromosome Location chr5:92928002-92928003
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:92920800-92929400 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
2 chr5:92922200-92931400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr5:92922200-92934200 Weak transcription HSMMtube muscle
4 chr5:92922600-92929200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr5:92922800-92929800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr5:92924200-92929400 Weak transcription HMEC breast
7 chr5:92924200-92935000 Weak transcription Gastric stomach
8 chr5:92924400-92929800 Weak transcription NHDF-Ad bronchial
9 chr5:92924600-92928600 Weak transcription Adipose Nuclei Adipose
10 chr5:92924600-92930600 Weak transcription Pancreas Pancrea
11 chr5:92924800-92929400 Weak transcription Osteobl bone
12 chr5:92925200-92928800 Weak transcription Brain Substantia Nigra brain
13 chr5:92925600-92930200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr5:92926000-92929000 Active TSS Fetal Brain Male brain
15 chr5:92926000-92929800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
16 chr5:92926200-92929000 Genic enhancers Fetal Stomach stomach
17 chr5:92926400-92932600 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr5:92926800-92929200 Weak transcription HSMM muscle
19 chr5:92926800-92931600 Weak transcription Brain Cingulate Gyrus brain
20 chr5:92927000-92928600 Weak transcription Hela-S3 cervix
21 chr5:92927000-92934600 Weak transcription HUVEC blood vessel
22 chr5:92927200-92928600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
23 chr5:92927400-92928600 Weak transcription Stomach Smooth Muscle stomach
24 chr5:92927400-92928600 Enhancers NH-A brain
25 chr5:92927400-92932200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr5:92927600-92928400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr5:92927600-92928400 Enhancers Brain Angular Gyrus brain
28 chr5:92927600-92928400 Active TSS Fetal Kidney kidney
29 chr5:92927600-92928600 Weak transcription Brain Hippocampus Middle brain
30 chr5:92927600-92928600 Weak transcription HepG2 liver
31 chr5:92927600-92928800 Active TSS Fetal Brain Female brain
32 chr5:92927600-92929200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:92927600-92929200 Weak transcription Spleen Spleen
34 chr5:92927600-92931600 Strong transcription Ovary ovary
35 chr5:92927800-92928800 Weak transcription Brain Anterior Caudate brain
36 chr5:92927800-92928800 Flanking Active TSS Brain Germinal Matrix brain
37 chr5:92927800-92929200 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr5:92927800-92929200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr5:92927800-92931600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr5:92928000-92928200 Bivalent Enhancer Fetal Lung lung
41 chr5:92928000-92928400 Weak transcription Brain Inferior Temporal Lobe brain
42 chr5:92928000-92928600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr5:92928000-92928600 Genic enhancers NHLF lung
44 chr5:92928000-92931200 Strong transcription Muscle Satellite Cultured Cells --

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