Variant report

Variant	rs59697965
Chromosome Location	chr8:108506919-108506920
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73699713	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv611861	chr8:108504907-108509116	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv611862	chr8:108504907-108513341	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1845767	chr8:108504907-108515373	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv1849422	chr8:108504907-108515373	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv1825455	chr8:108504907-108518274	Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv611866	chr8:108504961-108509116	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv611869	chr8:108505161-108509116	Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108497800-108508400	Weak transcription	Left Ventricle	heart
2	chr8:108498400-108507400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr8:108499400-108507000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr8:108500400-108507200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr8:108502400-108507600	Weak transcription	Psoas Muscle	Psoas
6	chr8:108502800-108507000	Weak transcription	Ovary	ovary
7	chr8:108502800-108507200	Weak transcription	A549	lung
8	chr8:108502800-108507600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr8:108502800-108509200	Weak transcription	NHEK	skin
10	chr8:108503000-108507400	Weak transcription	Rectal Smooth Muscle	rectum
11	chr8:108503000-108508400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr8:108505000-108508800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:108505200-108507000	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr8:108505200-108507400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr8:108505200-108507800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr8:108505200-108508000	Flanking Active TSS	Primary hematopoietic stem cells	blood
17	chr8:108505400-108507000	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr8:108505400-108508400	Enhancers	Primary T cells from cord blood	blood
19	chr8:108505400-108509200	Enhancers	Dnd41	blood
20	chr8:108506000-108507400	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr8:108506200-108507000	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr8:108506400-108507000	Enhancers	NHDF-Ad	bronchial
23	chr8:108506400-108507400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr8:108506400-108507600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr8:108506400-108507600	Enhancers	HUVEC	blood vessel
26	chr8:108506600-108507000	Enhancers	H1 Cell Line	embryonic stem cell
27	chr8:108506600-108507000	Enhancers	Brain Germinal Matrix	brain
28	chr8:108506600-108507000	Enhancers	Brain Substantia Nigra	brain
29	chr8:108506600-108507200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr8:108506600-108507200	Enhancers	H9 Cell Line	embryonic stem cell
31	chr8:108506600-108507200	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr8:108506600-108507200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
33	chr8:108506600-108507200	Enhancers	Breast Myoepithelial Primary Cells	Breast
34	chr8:108506600-108507200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
35	chr8:108506600-108507200	Flanking Active TSS	Fetal Lung	lung
36	chr8:108506600-108507600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr8:108506600-108507600	Enhancers	Cortex derived primary cultured neurospheres	brain
38	chr8:108506600-108507600	Enhancers	Colon Smooth Muscle	Colon
39	chr8:108506600-108507600	Flanking Active TSS	Osteobl	bone
40	chr8:108506600-108508200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr8:108506600-108509000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr8:108506600-108509200	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr8:108506600-108509800	Active TSS	Fetal Kidney	kidney
44	chr8:108506600-108510200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr8:108506800-108507000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr8:108506800-108507000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr8:108506800-108507000	Flanking Active TSS	Adipose Nuclei	Adipose
48	chr8:108506800-108507000	Enhancers	Brain Anterior Caudate	brain
49	chr8:108506800-108507000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
50	chr8:108506800-108507000	Enhancers	Thymus	Thymus

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