Variant report

Variant	rs59767722
Chromosome Location	chr6:79385719-79385720
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10485127	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16890280	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73474234	0.94[AFR][1000 genomes]
rs73474235	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474257	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73474264	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73474267	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73474269	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604011	chr6:79042990-79455282	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:79385600-79385800	Enhancers	Hela-S3	cervix
2	chr6:79385600-79386000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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