The 2.0 version of rSNPBase

Variant report

Variant rs59775550
Chromosome Location chr6:143803953-143803954
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143772600-143811600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:143772600-143832000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:143772800-143815000 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr6:143772800-143821200 Weak transcription Psoas Muscle Psoas
5 chr6:143773000-143811600 Weak transcription Right Ventricle heart
6 chr6:143773000-143814600 Weak transcription Rectal Smooth Muscle rectum
7 chr6:143773000-143814800 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr6:143773000-143815000 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr6:143773000-143815000 Weak transcription Colonic Mucosa Colon
10 chr6:143773200-143827000 Weak transcription Brain Germinal Matrix brain
11 chr6:143773400-143814200 Weak transcription K562 blood
12 chr6:143773400-143814600 Weak transcription HUVEC blood vessel
13 chr6:143773400-143814800 Weak transcription Hela-S3 cervix
14 chr6:143773400-143815000 Weak transcription A549 lung
15 chr6:143773400-143818200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr6:143773400-143832000 Weak transcription Fetal Brain Male brain
17 chr6:143774400-143819400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr6:143779000-143818200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr6:143779200-143816800 Weak transcription Placenta Amnion Placenta Amnion
20 chr6:143779400-143804600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr6:143781000-143832000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr6:143783000-143814600 Weak transcription Fetal Intestine Small intestine
23 chr6:143783200-143818400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr6:143784600-143814800 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr6:143784800-143814800 Weak transcription NHLF lung
26 chr6:143790200-143811600 Weak transcription Pancreas Pancrea
27 chr6:143790200-143811600 Weak transcription Spleen Spleen
28 chr6:143790200-143814800 Weak transcription Small Intestine intestine
29 chr6:143790200-143831600 Weak transcription Esophagus oesophagus
30 chr6:143790200-143831600 Weak transcription Gastric stomach
31 chr6:143791600-143811800 Weak transcription Thymus Thymus
32 chr6:143791800-143807000 Weak transcription Ovary ovary
33 chr6:143791800-143811600 Weak transcription Lung lung
34 chr6:143792800-143814800 Weak transcription NHDF-Ad bronchial
35 chr6:143793600-143810200 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr6:143793600-143819400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr6:143794000-143814600 Weak transcription NH-A brain
38 chr6:143794400-143807200 Weak transcription Brain Angular Gyrus brain
39 chr6:143794400-143814800 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr6:143794400-143814800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr6:143794400-143816000 Weak transcription Brain Substantia Nigra brain
42 chr6:143794600-143814800 Weak transcription Brain Inferior Temporal Lobe brain
43 chr6:143794600-143819400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr6:143794800-143817800 Weak transcription HSMMtube muscle
45 chr6:143795000-143812000 Weak transcription Duodenum Mucosa Duodenum
46 chr6:143795200-143827400 Weak transcription Aorta Aorta
47 chr6:143795400-143814800 Weak transcription Osteobl bone
48 chr6:143795800-143831800 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr6:143796600-143807000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr6:143796600-143814400 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015