Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10500558	0.83[ASN][1000 genomes]
rs11640165	0.83[ASN][1000 genomes]
rs11641492	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11643216	0.83[ASN][1000 genomes]
rs11647749	0.84[ASN][1000 genomes]
rs2004672	0.81[ASN][1000 genomes]
rs28372238	0.83[ASN][1000 genomes]
rs310334	0.83[ASN][1000 genomes]
rs4149498	0.83[ASN][1000 genomes]
rs58719913	0.83[ASN][1000 genomes]
rs7184543	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7186241	0.84[ASN][1000 genomes]
rs7199026	0.84[ASN][1000 genomes]
rs7202662	0.84[ASN][1000 genomes]
rs7202953	0.82[ASN][1000 genomes]
rs74026831	0.84[ASN][1000 genomes]
rs74027246	0.83[ASN][1000 genomes]
rs8044068	0.81[ASN][1000 genomes]
rs8044561	0.82[ASN][1000 genomes]
rs8053662	0.83[ASN][1000 genomes]
rs9926110	0.82[ASN][1000 genomes]
rs9928243	0.84[ASN][1000 genomes]
rs9933680	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949461	chr16:71196153-71579711	ZNF genes & repeats Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
2	nsv906892	chr16:71526720-71570413	Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:71549200-71558400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr16:71551200-71554400	Weak transcription	Pancreas	Pancrea
3	chr16:71553400-71553600	Enhancers	Brain Hippocampus Middle	brain
4	chr16:71553400-71554000	Bivalent Enhancer	HepG2	liver

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