The 2.0 version of rSNPBase

Variant report

Variant rs59831047
Chromosome Location chr11:119598098-119598099
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:119595800-119598200 Flanking Active TSS Brain Inferior Temporal Lobe brain
2 chr11:119596000-119598400 Flanking Active TSS Brain Angular Gyrus brain
3 chr11:119596400-119598200 Enhancers Sigmoid Colon Sigmoid Colon
4 chr11:119596400-119598400 Flanking Active TSS Duodenum Mucosa Duodenum
5 chr11:119596600-119598800 Flanking Active TSS Brain Hippocampus Middle brain
6 chr11:119596600-119600400 Active TSS Esophagus oesophagus
7 chr11:119596800-119598200 Bivalent Enhancer Primary hematopoietic stem cells blood
8 chr11:119597000-119598200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:119597000-119598200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
10 chr11:119597000-119598200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
11 chr11:119597000-119598200 Enhancers Spleen Spleen
12 chr11:119597000-119598600 Flanking Active TSS Fetal Brain Male brain
13 chr11:119597000-119599200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
14 chr11:119597000-119599200 Flanking Active TSS GM12878-XiMat blood
15 chr11:119597200-119598200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr11:119597200-119598200 Enhancers Fetal Lung lung
17 chr11:119597200-119598800 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
18 chr11:119597200-119599200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
19 chr11:119597200-119599200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
20 chr11:119597200-119599200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
21 chr11:119597200-119599600 Active TSS ES-WA7 Cell Line embryonic stem cell
22 chr11:119597200-119600400 Active TSS H1 Cell Line embryonic stem cell
23 chr11:119597200-119600400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr11:119597200-119600400 Active TSS iPS-15b Cell Line embryonic stem cell
25 chr11:119597200-119600800 Active TSS HUES48 Cell Line embryonic stem cell
26 chr11:119597200-119601000 Active TSS ES-I3 Cell Line embryonic stem cell
27 chr11:119597200-119601000 Active TSS H9 Cell Line embryonic stem cell
28 chr11:119597400-119598200 Bivalent Enhancer Primary B cells from peripheral blood blood
29 chr11:119597400-119598200 Enhancers Liver Liver
30 chr11:119597400-119598200 Flanking Active TSS Pancreas Pancrea
31 chr11:119597400-119598400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr11:119597400-119598400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
33 chr11:119597400-119598400 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
34 chr11:119597400-119598800 Flanking Active TSS Stomach Smooth Muscle stomach
35 chr11:119597400-119599200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
36 chr11:119597400-119600600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr11:119597400-119600800 Active TSS Pancreatic Islets Pancreatic Islet
38 chr11:119597400-119601000 Active TSS HUES64 Cell Line embryonic stem cell
39 chr11:119597400-119601000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
40 chr11:119597600-119598200 Bivalent Enhancer Primary T cells fromperipheralblood blood
41 chr11:119597600-119598400 Flanking Bivalent TSS/Enh Placenta Placenta
42 chr11:119597600-119598400 Enhancers Placenta Amnion Placenta Amnion
43 chr11:119597600-119598400 Flanking Active TSS Rectal Smooth Muscle rectum
44 chr11:119597600-119598600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
45 chr11:119597600-119598600 Flanking Active TSS Fetal Intestine Large intestine
46 chr11:119597600-119598600 Flanking Active TSS NH-A brain
47 chr11:119597600-119598800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
48 chr11:119597600-119598800 Flanking Bivalent TSS/Enh Fetal Stomach stomach
49 chr11:119597600-119598800 Flanking Active TSS Right Ventricle heart
50 chr11:119597600-119598800 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015