The 2.0 version of rSNPBase

Variant report

Variant rs59949849
Chromosome Location chr4:53783795-53783796
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53729200-53807800 Weak transcription Esophagus oesophagus
2 chr4:53734600-53822400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr4:53736600-53785600 Weak transcription Stomach Smooth Muscle stomach
4 chr4:53761000-53788000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr4:53767600-53789000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr4:53768600-53788200 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr4:53768800-53815600 Weak transcription Primary hematopoietic stem cells blood
8 chr4:53769000-53804400 Weak transcription Primary B cells from peripheral blood blood
9 chr4:53769600-53785000 Weak transcription Primary B cells from cord blood blood
10 chr4:53769600-53792000 Weak transcription Lung lung
11 chr4:53771000-53791600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr4:53773600-53787000 Weak transcription Dnd41 blood
13 chr4:53773800-53784800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr4:53774600-53798400 Weak transcription HSMMtube muscle
15 chr4:53778400-53785200 Weak transcription NHEK skin
16 chr4:53779000-53785200 Weak transcription Small Intestine intestine
17 chr4:53779400-53783800 Weak transcription H1 Cell Line embryonic stem cell
18 chr4:53780800-53784000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr4:53780800-53785200 Weak transcription Adipose Nuclei Adipose
20 chr4:53780800-53786600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr4:53781400-53788600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr4:53781600-53791800 Weak transcription Osteobl bone
23 chr4:53782200-53785000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr4:53782200-53791600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr4:53782200-53792400 Weak transcription Pancreas Pancrea
26 chr4:53782200-53799000 Weak transcription NHLF lung
27 chr4:53782400-53784200 Weak transcription HSMM muscle
28 chr4:53782400-53785200 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr4:53782400-53785200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr4:53782400-53785800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr4:53782400-53786000 Weak transcription HepG2 liver
32 chr4:53782400-53786400 Weak transcription Fetal Lung lung
33 chr4:53782400-53787400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:53782400-53790600 Weak transcription Fetal Intestine Large intestine
35 chr4:53782400-53791600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr4:53782400-53791800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr4:53782400-53792000 Weak transcription Fetal Muscle Leg muscle
38 chr4:53782400-53794600 Weak transcription Fetal Stomach stomach
39 chr4:53782400-53797200 Weak transcription Liver Liver
40 chr4:53782600-53783800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr4:53782800-53784000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr4:53783000-53785000 Weak transcription NHDF-Ad bronchial
43 chr4:53783000-53791800 Weak transcription Stomach Mucosa stomach
44 chr4:53783600-53783800 Enhancers Gastric stomach
45 chr4:53783600-53784400 Enhancers HUES6 Cell Line embryonic stem cell
46 chr4:53783600-53784400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr4:53783600-53786800 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015