Variant report

Variant rs5997411
Chromosome Location chr22:20783485-20783486
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20778200-20785400 Weak transcription HSMM muscle
2 chr22:20778600-20786200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr22:20778600-20789400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr22:20779000-20785000 Strong transcription Muscle Satellite Cultured Cells --
5 chr22:20779200-20784200 Strong transcription Ovary ovary
6 chr22:20779200-20784400 Strong transcription Cortex derived primary cultured neurospheres brain
7 chr22:20779200-20784600 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr22:20779200-20785000 Weak transcription Left Ventricle heart
9 chr22:20779200-20785600 Strong transcription NHLF lung
10 chr22:20779400-20785200 Strong transcription Aorta Aorta
11 chr22:20779600-20789200 Weak transcription NHDF-Ad bronchial
12 chr22:20780200-20783800 ZNF genes & repeats Fetal Stomach stomach
13 chr22:20780400-20783600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr22:20780600-20783800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr22:20780600-20784200 Strong transcription Fetal Lung lung
16 chr22:20780600-20785200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr22:20780600-20785400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr22:20780800-20783800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr22:20780800-20783800 Weak transcription Placenta Amnion Placenta Amnion
20 chr22:20780800-20783800 Strong transcription NH-A brain
21 chr22:20780800-20785000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr22:20780800-20785000 Strong transcription Right Atrium heart
23 chr22:20781200-20783800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr22:20781400-20785600 Strong transcription Osteobl bone
25 chr22:20781600-20783800 Strong transcription Skeletal Muscle Male skeletal muscle
26 chr22:20781600-20785000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr22:20782000-20786600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr22:20782200-20783800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr22:20782400-20784800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr22:20782600-20784800 Weak transcription Colon Smooth Muscle Colon
31 chr22:20782800-20784200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
32 chr22:20783000-20783600 Bivalent Enhancer Fetal Intestine Small intestine
33 chr22:20783000-20783600 Flanking Bivalent TSS/Enh K562 blood
34 chr22:20783000-20784200 Strong transcription HUVEC blood vessel
35 chr22:20783000-20784600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr22:20783000-20785200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr22:20783000-20785200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
38 chr22:20783000-20785200 Genic enhancers Spleen Spleen
39 chr22:20783000-20786200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
40 chr22:20783200-20783600 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
41 chr22:20783200-20783600 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
42 chr22:20783200-20783600 Flanking Bivalent TSS/Enh Primary B cells from peripheral blood blood
43 chr22:20783200-20783600 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
44 chr22:20783200-20783600 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
45 chr22:20783200-20783600 Flanking Active TSS Primary hematopoietic stem cells blood
46 chr22:20783200-20783600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
47 chr22:20783200-20783600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
48 chr22:20783200-20783600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
49 chr22:20783200-20783600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
50 chr22:20783200-20783600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood

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