Variant report

Variant rs5997702
Chromosome Location chr22:31004828-31004829
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31001400-31006400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr22:31002000-31007000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr22:31002200-31005000 Active TSS iPS-18 Cell Line embryonic stem cell
4 chr22:31003000-31005000 Enhancers Sigmoid Colon Sigmoid Colon
5 chr22:31003000-31005600 Enhancers Primary B cells from cord blood blood
6 chr22:31003200-31005600 Enhancers Primary B cells from peripheral blood blood
7 chr22:31003200-31006000 Flanking Active TSS Adipose Nuclei Adipose
8 chr22:31003200-31007000 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr22:31003200-31031200 Weak transcription Aorta Aorta
10 chr22:31003400-31005200 Weak transcription Ovary ovary
11 chr22:31003400-31005400 Enhancers Gastric stomach
12 chr22:31003400-31005800 Enhancers Placenta Amnion Placenta Amnion
13 chr22:31003400-31006000 Flanking Active TSS Colon Smooth Muscle Colon
14 chr22:31003400-31006400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr22:31003400-31006600 Enhancers Fetal Thymus thymus
16 chr22:31003400-31007000 Enhancers Spleen Spleen
17 chr22:31003600-31005000 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr22:31003600-31005000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr22:31003600-31005200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr22:31003600-31005200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr22:31003600-31005200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
22 chr22:31003600-31005400 Enhancers Small Intestine intestine
23 chr22:31003600-31005600 Enhancers NHLF lung
24 chr22:31003600-31006000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr22:31003600-31006000 Enhancers Colonic Mucosa Colon
26 chr22:31003600-31006000 Enhancers Esophagus oesophagus
27 chr22:31003600-31006000 Enhancers Skeletal Muscle Female skeletal muscle
28 chr22:31003600-31006000 Enhancers Stomach Mucosa stomach
29 chr22:31003600-31006000 Enhancers HSMM muscle
30 chr22:31003600-31006200 Enhancers Fetal Muscle Trunk muscle
31 chr22:31003600-31006400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr22:31003600-31006400 Enhancers NHDF-Ad bronchial
33 chr22:31003600-31006600 Enhancers Fetal Muscle Leg muscle
34 chr22:31003800-31005000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr22:31003800-31005000 Enhancers Brain Angular Gyrus brain
36 chr22:31003800-31005000 Enhancers Lung lung
37 chr22:31003800-31005000 Enhancers Psoas Muscle Psoas
38 chr22:31003800-31005200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr22:31003800-31005200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr22:31003800-31005200 Enhancers Brain Hippocampus Middle brain
41 chr22:31003800-31005200 Weak transcription Right Atrium heart
42 chr22:31003800-31005600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr22:31003800-31005600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr22:31003800-31006000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr22:31003800-31006000 Enhancers Muscle Satellite Cultured Cells --
46 chr22:31003800-31006000 Bivalent Enhancer HepG2 liver
47 chr22:31003800-31006200 Enhancers Fetal Intestine Large intestine
48 chr22:31003800-31006400 Enhancers Primary hematopoietic stem cells blood
49 chr22:31003800-31007600 Enhancers Primary monocytes fromperipheralblood blood
50 chr22:31003800-31009800 Weak transcription HUES48 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links