The 2.0 version of rSNPBase

Variant report

Variant rs5997727
Chromosome Location chr22:31052375-31052376
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31032400-31052400 Weak transcription H9 Cell Line embryonic stem cell
2 chr22:31033400-31058200 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr22:31033600-31058000 Weak transcription Adipose Nuclei Adipose
4 chr22:31033600-31058000 Weak transcription Fetal Lung lung
5 chr22:31033800-31057600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr22:31034000-31059400 Weak transcription Aorta Aorta
7 chr22:31034200-31057800 Weak transcription Colon Smooth Muscle Colon
8 chr22:31034200-31058800 Weak transcription Rectal Smooth Muscle rectum
9 chr22:31040200-31060800 Weak transcription Fetal Brain Male brain
10 chr22:31040600-31055800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr22:31043600-31055400 Weak transcription Fetal Stomach stomach
12 chr22:31044200-31057600 Weak transcription Ovary ovary
13 chr22:31044200-31058000 Weak transcription Stomach Smooth Muscle stomach
14 chr22:31045200-31062800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr22:31045400-31057600 Weak transcription Colonic Mucosa Colon
16 chr22:31045400-31057600 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr22:31045400-31062800 Weak transcription Placenta Amnion Placenta Amnion
18 chr22:31045400-31062800 Weak transcription NH-A brain
19 chr22:31045600-31058200 Weak transcription Primary hematopoietic stem cells blood
20 chr22:31045600-31062800 Weak transcription HSMMtube muscle
21 chr22:31045800-31057600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr22:31045800-31057800 Weak transcription Duodenum Mucosa Duodenum
23 chr22:31045800-31061400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr22:31045800-31062200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr22:31046000-31054800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr22:31046000-31057600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr22:31046000-31057600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr22:31046000-31057600 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr22:31046000-31057600 Weak transcription NHDF-Ad bronchial
30 chr22:31046000-31057800 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr22:31046000-31057800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr22:31046000-31057800 Weak transcription Osteobl bone
33 chr22:31046000-31058000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr22:31046000-31058400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr22:31046000-31062000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr22:31046000-31062200 Weak transcription Muscle Satellite Cultured Cells --
37 chr22:31046000-31062600 Weak transcription HMEC breast
38 chr22:31046000-31062600 Weak transcription NHLF lung
39 chr22:31046800-31057600 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr22:31046800-31057600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr22:31046800-31057600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr22:31046800-31062000 Weak transcription Stomach Mucosa stomach
43 chr22:31047000-31055800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr22:31047000-31057600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr22:31047000-31057600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr22:31047000-31057600 Weak transcription Fetal Intestine Large intestine
47 chr22:31047000-31057600 Weak transcription Fetal Muscle Leg muscle
48 chr22:31047000-31057800 Weak transcription Primary B cells from peripheral blood blood
49 chr22:31047000-31057800 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr22:31047000-31058000 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015