Variant report

Variant rs6000569
Chromosome Location chr22:20864940-20864941
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20862400-20865200 Flanking Active TSS Duodenum Mucosa Duodenum
2 chr22:20862800-20866400 Enhancers Spleen Spleen
3 chr22:20863200-20865000 Flanking Active TSS Osteobl bone
4 chr22:20863200-20865400 Flanking Active TSS NH-A brain
5 chr22:20863600-20865000 Enhancers Pancreas Pancrea
6 chr22:20863600-20866800 Enhancers Small Intestine intestine
7 chr22:20863800-20865000 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr22:20863800-20865200 Enhancers Brain Germinal Matrix brain
9 chr22:20863800-20865800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr22:20863800-20865800 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr22:20863800-20865800 Enhancers Placenta Placenta
12 chr22:20863800-20866200 Enhancers Esophagus oesophagus
13 chr22:20863800-20866200 Enhancers Left Ventricle heart
14 chr22:20863800-20866600 Enhancers Liver Liver
15 chr22:20863800-20866800 Enhancers Sigmoid Colon Sigmoid Colon
16 chr22:20863800-20868000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr22:20863800-20874400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr22:20864000-20865000 Enhancers HUES6 Cell Line embryonic stem cell
19 chr22:20864000-20865000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
20 chr22:20864000-20865200 Genic enhancers Dnd41 blood
21 chr22:20864000-20865200 Flanking Active TSS NHLF lung
22 chr22:20864000-20865600 Enhancers Cortex derived primary cultured neurospheres brain
23 chr22:20864000-20865600 Enhancers Fetal Kidney kidney
24 chr22:20864000-20865800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
25 chr22:20864000-20865800 Genic enhancers Fetal Thymus thymus
26 chr22:20864000-20866000 Enhancers Brain Substantia Nigra brain
27 chr22:20864000-20866800 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr22:20864000-20866800 Enhancers Fetal Heart heart
29 chr22:20864000-20868000 Weak transcription Thymus Thymus
30 chr22:20864200-20865000 Genic enhancers Primary hematopoietic stem cells short term culture blood
31 chr22:20864200-20865000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
32 chr22:20864200-20865000 Enhancers Rectal Mucosa Donor 31 rectum
33 chr22:20864200-20865000 Flanking Active TSS HSMMtube muscle
34 chr22:20864200-20865200 Enhancers ES-I3 Cell Line embryonic stem cell
35 chr22:20864200-20865200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr22:20864200-20865200 Enhancers Primary monocytes fromperipheralblood blood
37 chr22:20864200-20865200 Enhancers Primary T helper cells fromperipheralblood blood
38 chr22:20864200-20865200 Enhancers Colon Smooth Muscle Colon
39 chr22:20864200-20865400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
40 chr22:20864200-20865400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
41 chr22:20864200-20865400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr22:20864200-20865400 Enhancers Fetal Brain Female brain
43 chr22:20864200-20865400 Transcr. at gene 5' and 3' HSMM muscle
44 chr22:20864200-20865600 Enhancers HUES48 Cell Line embryonic stem cell
45 chr22:20864200-20865600 Enhancers HUES64 Cell Line embryonic stem cell
46 chr22:20864200-20865600 Enhancers Fetal Lung lung
47 chr22:20864200-20865800 Enhancers Brain Angular Gyrus brain
48 chr22:20864200-20865800 Enhancers Colonic Mucosa Colon
49 chr22:20864200-20866000 Enhancers Brain Anterior Caudate brain
50 chr22:20864200-20866000 Genic enhancers Fetal Intestine Small intestine

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