Variant report

Variant	rs60013537
Chromosome Location	chr1:92927441-92927442
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs57304613	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60081973	1.00[AMR][1000 genomes]
rs61527013	1.00[AMR][1000 genomes]
rs61638989	0.83[AFR][1000 genomes]
rs72962609	1.00[AMR][1000 genomes]
rs72962615	1.00[AMR][1000 genomes]
rs72962632	1.00[AMR][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:92925400-92929600	Enhancers	GM12878-XiMat	blood
2	chr1:92925600-92946000	Weak transcription	Right Atrium	heart
3	chr1:92925800-92927600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
4	chr1:92925800-92929000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr1:92925800-92929000	Weak transcription	Duodenum Mucosa	Duodenum
6	chr1:92925800-92930200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr1:92925800-92931400	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr1:92925800-92931800	Weak transcription	Primary B cells from peripheral blood	blood
9	chr1:92926000-92928600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr1:92926000-92928600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr1:92926000-92928800	Enhancers	Primary hematopoietic stem cells	blood
12	chr1:92926000-92928800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
13	chr1:92926000-92928800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr1:92926000-92929000	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr1:92926000-92929200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
16	chr1:92926000-92929200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr1:92926200-92928400	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr1:92926200-92928600	Weak transcription	Primary T cells from cord blood	blood
19	chr1:92926200-92929200	Weak transcription	Primary T cells fromperipheralblood	blood
20	chr1:92926200-92934200	Enhancers	Dnd41	blood
21	chr1:92926400-92928600	Weak transcription	Primary T helper cells fromperipheralblood	blood
22	chr1:92926400-92928800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr1:92926400-92929000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr1:92926400-92933600	Enhancers	Primary neutrophils fromperipheralblood	blood
25	chr1:92926600-92929200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr1:92927000-92927600	Enhancers	Primary T killer memory cells from peripheral blood	blood
27	chr1:92927000-92927800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
28	chr1:92927200-92928000	Enhancers	Primary B cells from cord blood	blood
29	chr1:92927200-92929000	Weak transcription	Thymus	Thymus
30	chr1:92927200-92929200	Weak transcription	Fetal Thymus	thymus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links