Variant report

Variant rs6001780
Chromosome Location chr22:22674650-22674651
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22653000-22675600 Weak transcription Small Intestine intestine
2 chr22:22653000-22676800 Weak transcription Stomach Mucosa stomach
3 chr22:22653000-22677400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr22:22653200-22676800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr22:22653800-22676600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr22:22653800-22677800 Weak transcription Primary hematopoietic stem cells blood
7 chr22:22653800-22678400 Weak transcription NH-A brain
8 chr22:22661600-22676600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr22:22667200-22676600 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr22:22669000-22676600 Strong transcription Fetal Muscle Leg muscle
11 chr22:22669200-22676400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr22:22669400-22674800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr22:22669400-22675000 Strong transcription Liver Liver
14 chr22:22669400-22675000 Strong transcription Ovary ovary
15 chr22:22669400-22675200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr22:22669400-22675400 Strong transcription Primary T cells from cord blood blood
17 chr22:22669400-22676200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr22:22669400-22676200 Strong transcription Primary T cells fromperipheralblood blood
19 chr22:22669400-22676200 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr22:22669400-22677600 Strong transcription Fetal Muscle Trunk muscle
21 chr22:22669600-22674800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr22:22669600-22676200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr22:22669600-22677600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr22:22669800-22675800 Strong transcription Stomach Smooth Muscle stomach
25 chr22:22669800-22678000 Strong transcription Fetal Stomach stomach
26 chr22:22670200-22675800 Weak transcription HSMM muscle
27 chr22:22670800-22675800 Weak transcription NHDF-Ad bronchial
28 chr22:22670800-22677600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr22:22671000-22674800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr22:22671200-22675200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr22:22671200-22675600 Strong transcription Fetal Brain Female brain
32 chr22:22671200-22676000 Weak transcription Right Atrium heart
33 chr22:22671600-22675000 Strong transcription Pancreas Pancrea
34 chr22:22671600-22675200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr22:22672000-22675000 Strong transcription Aorta Aorta
36 chr22:22672200-22675000 Strong transcription Fetal Intestine Small intestine
37 chr22:22672200-22675000 Strong transcription Thymus Thymus
38 chr22:22672200-22678200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr22:22672400-22675000 Strong transcription Sigmoid Colon Sigmoid Colon
40 chr22:22672600-22676400 Strong transcription NHEK skin
41 chr22:22672800-22675200 Weak transcription HMEC breast
42 chr22:22673400-22676200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr22:22673400-22676400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr22:22673600-22675800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr22:22673600-22676000 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr22:22673600-22676000 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr22:22673600-22676400 Weak transcription Fetal Kidney kidney
48 chr22:22673800-22675200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr22:22673800-22675400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr22:22673800-22675600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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