Variant report

Variant rs60031052
Chromosome Location chr15:78349828-78349829
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78296200-78358200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr15:78309200-78354200 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr15:78327600-78351400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr15:78343200-78354200 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr15:78344400-78352000 Genic enhancers Fetal Intestine Small intestine
6 chr15:78344800-78357600 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr15:78344800-78359800 Weak transcription Fetal Brain Female brain
8 chr15:78345000-78352000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr15:78345000-78354200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr15:78345200-78351400 Weak transcription Fetal Kidney kidney
11 chr15:78345600-78351800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr15:78346200-78350000 Enhancers Liver Liver
13 chr15:78346200-78354200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr15:78346400-78353200 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr15:78346400-78354200 Enhancers Primary T cells fromperipheralblood blood
16 chr15:78346400-78356600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr15:78346600-78353000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
18 chr15:78346600-78354200 Enhancers Primary T helper cells fromperipheralblood blood
19 chr15:78346800-78354400 Enhancers Primary B cells from cord blood blood
20 chr15:78347000-78350400 Enhancers Primary Natural Killer cells fromperipheralblood blood
21 chr15:78347000-78351200 Enhancers HSMM muscle
22 chr15:78347000-78351400 Enhancers Fetal Muscle Leg muscle
23 chr15:78347000-78352800 Enhancers Stomach Mucosa stomach
24 chr15:78347000-78357400 Enhancers Fetal Thymus thymus
25 chr15:78347200-78352200 Enhancers Small Intestine intestine
26 chr15:78347400-78350000 Enhancers Duodenum Mucosa Duodenum
27 chr15:78347400-78350000 Enhancers Skeletal Muscle Female skeletal muscle
28 chr15:78347400-78350200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr15:78347400-78350400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr15:78347400-78350800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr15:78347400-78351400 Enhancers HSMMtube muscle
32 chr15:78347400-78352200 Enhancers Primary hematopoietic stem cells blood
33 chr15:78347400-78352400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr15:78347400-78352400 Enhancers Fetal Intestine Large intestine
35 chr15:78347400-78352600 Enhancers Brain Anterior Caudate brain
36 chr15:78347400-78354000 Enhancers NHDF-Ad bronchial
37 chr15:78347400-78354200 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr15:78347400-78354200 Enhancers Adipose Nuclei Adipose
39 chr15:78347400-78367800 Enhancers Placenta Placenta
40 chr15:78347600-78352200 Enhancers Colon Smooth Muscle Colon
41 chr15:78347600-78352600 Enhancers Brain Cingulate Gyrus brain
42 chr15:78347600-78352800 Enhancers Pancreas Pancrea
43 chr15:78347600-78353000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
44 chr15:78347800-78350800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr15:78347800-78351000 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr15:78347800-78352000 Enhancers Primary monocytes fromperipheralblood blood
47 chr15:78348000-78355400 Enhancers Primary B cells from peripheral blood blood
48 chr15:78348200-78350600 Enhancers Osteobl bone
49 chr15:78348200-78352400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr15:78348200-78352600 Enhancers HUVEC blood vessel

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