The 2.0 version of rSNPBase

Variant report

Variant rs60064757
Chromosome Location chr22:28419790-28419791
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28396000-28422400 Weak transcription Primary T cells from cord blood blood
2 chr22:28397200-28423000 Weak transcription HepG2 liver
3 chr22:28399400-28425800 Weak transcription Liver Liver
4 chr22:28409000-28428000 Genic enhancers Fetal Muscle Leg muscle
5 chr22:28409400-28430400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr22:28410200-28423000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr22:28410200-28423400 Weak transcription Gastric stomach
8 chr22:28410400-28424200 Weak transcription Aorta Aorta
9 chr22:28411000-28423600 Weak transcription Fetal Intestine Large intestine
10 chr22:28412400-28423000 Weak transcription Adipose Nuclei Adipose
11 chr22:28416000-28425000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr22:28416400-28421600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr22:28416600-28422000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr22:28416600-28431000 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr22:28416800-28423000 Weak transcription Fetal Kidney kidney
16 chr22:28416800-28423400 Weak transcription Pancreas Pancrea
17 chr22:28416800-28424200 Strong transcription Fetal Intestine Small intestine
18 chr22:28416800-28425200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr22:28417000-28420000 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr22:28417000-28420200 Weak transcription Left Ventricle heart
21 chr22:28417000-28420200 Weak transcription Psoas Muscle Psoas
22 chr22:28417000-28421800 Weak transcription Spleen Spleen
23 chr22:28417000-28423200 Weak transcription Brain Anterior Caudate brain
24 chr22:28417000-28423400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr22:28417000-28425800 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr22:28417200-28420800 Weak transcription Muscle Satellite Cultured Cells --
27 chr22:28417200-28421400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr22:28417200-28423200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr22:28417200-28424600 Weak transcription Colonic Mucosa Colon
30 chr22:28417200-28426000 Weak transcription Brain Angular Gyrus brain
31 chr22:28417400-28420000 Weak transcription HSMM muscle
32 chr22:28417400-28420200 Weak transcription HSMMtube muscle
33 chr22:28417400-28420800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr22:28417400-28423000 Weak transcription Brain Cingulate Gyrus brain
35 chr22:28417400-28423200 Weak transcription Brain Germinal Matrix brain
36 chr22:28417400-28423200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr22:28417400-28423800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr22:28417400-28424200 Weak transcription Brain Hippocampus Middle brain
39 chr22:28417400-28424800 Weak transcription NHLF lung
40 chr22:28417600-28421800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr22:28417600-28423200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr22:28417600-28424600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr22:28417600-28425400 Weak transcription NHDF-Ad bronchial
44 chr22:28417800-28420800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr22:28417800-28423600 Weak transcription Fetal Lung lung
46 chr22:28417800-28426200 Genic enhancers Fetal Muscle Trunk muscle
47 chr22:28418000-28419800 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr22:28418000-28421400 Weak transcription Stomach Smooth Muscle stomach
49 chr22:28418200-28419800 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr22:28418200-28420400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015