The 2.0 version of rSNPBase

Variant report

Variant rs60103250
Chromosome Location chr9:116798653-116798654
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116733400-116800200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:116766200-116799000 Weak transcription Rectal Smooth Muscle rectum
3 chr9:116766600-116811200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr9:116773600-116809200 Weak transcription Fetal Heart heart
5 chr9:116780800-116800200 Weak transcription Esophagus oesophagus
6 chr9:116785200-116811200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr9:116785400-116799000 Weak transcription Brain Substantia Nigra brain
8 chr9:116785400-116810600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr9:116786400-116798800 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr9:116786800-116799000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr9:116787000-116799200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr9:116787000-116800200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr9:116787000-116803000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr9:116787000-116812800 Weak transcription Primary B cells from cord blood blood
15 chr9:116787200-116799200 Strong transcription Fetal Intestine Small intestine
16 chr9:116787400-116800200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:116788000-116802400 Strong transcription Adipose Nuclei Adipose
18 chr9:116788200-116798800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr9:116788200-116800000 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr9:116788400-116799600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr9:116789600-116800600 Strong transcription NHLF lung
22 chr9:116789600-116808600 Weak transcription HMEC breast
23 chr9:116790600-116801400 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr9:116790600-116801600 Strong transcription Spleen Spleen
25 chr9:116790600-116802600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr9:116790600-116802600 Strong transcription Liver Liver
27 chr9:116792200-116802800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr9:116792200-116810400 Weak transcription Thymus Thymus
29 chr9:116792400-116801600 Strong transcription HUVEC blood vessel
30 chr9:116793000-116799000 Weak transcription Fetal Thymus thymus
31 chr9:116793000-116802600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr9:116793200-116811200 Weak transcription Stomach Mucosa stomach
33 chr9:116793200-116812200 Weak transcription K562 blood
34 chr9:116793200-116813800 Weak transcription NHEK skin
35 chr9:116793400-116798800 Weak transcription Fetal Kidney kidney
36 chr9:116794000-116802400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr9:116794200-116800800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr9:116794200-116801600 Strong transcription Pancreas Pancrea
39 chr9:116794600-116801400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr9:116794800-116799600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr9:116795000-116801600 Strong transcription Fetal Intestine Large intestine
42 chr9:116795200-116802600 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr9:116795200-116821800 Weak transcription Right Atrium heart
44 chr9:116795600-116802400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr9:116795800-116800000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr9:116795800-116801600 Strong transcription Skeletal Muscle Male skeletal muscle
47 chr9:116796000-116799600 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr9:116796000-116800000 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr9:116796000-116802600 Strong transcription A549 lung
50 chr9:116796000-116802800 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015