Variant report

Variant	rs60205599
Chromosome Location	chr20:22295183-22295184
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs73294603	1.00[AMR][1000 genomes]
rs73296660	1.00[AMR][1000 genomes]
rs73296661	1.00[AMR][1000 genomes]
rs73296665	1.00[AMR][1000 genomes]
rs73296672	1.00[AMR][1000 genomes]
rs73296688	1.00[AMR][1000 genomes]
rs73298911	1.00[AMR][1000 genomes]
rs73298916	1.00[AMR][1000 genomes]
rs73298928	1.00[AMR][1000 genomes]
rs73310031	1.00[AMR][1000 genomes]
rs73310068	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833942	chr20:22283122-22440749	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22293800-22295800	Weak transcription	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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