The 2.0 version of rSNPBase

Variant report

Variant rs60239792
Chromosome Location chr12:122959975-122959976
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:122922800-122960400 Weak transcription Right Atrium heart
2 chr12:122954200-122960000 Weak transcription Fetal Brain Male brain
3 chr12:122954400-122960000 Weak transcription Fetal Heart heart
4 chr12:122955200-122983400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:122955200-122983400 Strong transcription Fetal Thymus thymus
6 chr12:122955600-122980800 Strong transcription HUES6 Cell Line embryonic stem cell
7 chr12:122955600-122981200 Strong transcription Dnd41 blood
8 chr12:122955600-122982200 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr12:122955600-122982600 Strong transcription HUES48 Cell Line embryonic stem cell
10 chr12:122955800-122977600 Strong transcription H1 Cell Line embryonic stem cell
11 chr12:122956200-122960200 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr12:122956200-122964800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr12:122956200-122972600 Weak transcription Stomach Mucosa stomach
14 chr12:122956200-122984000 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr12:122956400-122960000 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr12:122956400-122961400 Strong transcription NH-A brain
17 chr12:122956400-122963000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr12:122956600-122960800 Strong transcription Fetal Kidney kidney
19 chr12:122956600-122982400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr12:122956600-122982800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr12:122956600-122983000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr12:122956800-122966200 Strong transcription Fetal Intestine Small intestine
23 chr12:122956800-122966600 Strong transcription Fetal Muscle Leg muscle
24 chr12:122956800-122969600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr12:122957000-122960200 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr12:122957000-122965400 Strong transcription Esophagus oesophagus
27 chr12:122957000-122966200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr12:122957000-122966200 Strong transcription Fetal Stomach stomach
29 chr12:122957000-122966200 Strong transcription Lung lung
30 chr12:122957000-122966600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr12:122957000-122966600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr12:122957000-122966600 Strong transcription Fetal Muscle Trunk muscle
33 chr12:122957000-122969200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr12:122957000-122971400 Strong transcription Liver Liver
35 chr12:122957000-122973600 Strong transcription Fetal Intestine Large intestine
36 chr12:122957000-122977600 Strong transcription Thymus Thymus
37 chr12:122957000-122977800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr12:122957000-122978200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr12:122957000-122981200 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr12:122957000-122981600 Strong transcription iPS-18 Cell Line embryonic stem cell
41 chr12:122957000-122981800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr12:122957000-122982600 Strong transcription Primary monocytes fromperipheralblood blood
43 chr12:122957200-122966000 Strong transcription Brain Cingulate Gyrus brain
44 chr12:122957200-122968200 Strong transcription HSMM muscle
45 chr12:122957200-122968400 Strong transcription Primary hematopoietic stem cells blood
46 chr12:122957200-122971400 Strong transcription Skeletal Muscle Female skeletal muscle
47 chr12:122957200-122977000 Strong transcription Primary T cells fromperipheralblood blood
48 chr12:122957200-122977600 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr12:122957200-122977600 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr12:122957200-122977600 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015