Variant report

Variant	rs60308909
Chromosome Location	chr14:67658738-67658739
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr14:67658454-67658821	SK-N-SH	brain:	n/a	n/a
2	FOSL2	chr14:67658377-67658964	SK-N-SH	brain:	n/a	n/a

Variant related genes	Relation type
FAM71D	TF binding region

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902058	chr14:67310195-67760538	Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv902059	chr14:67352226-67760538	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
3	esv2751285	chr14:67364747-67886781	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
4	nsv902060	chr14:67417083-67760538	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
5	nsv1045518	chr14:67529049-67959582	Strong transcription Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
6	nsv832821	chr14:67590418-67828169	Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
7	nsv1040257	chr14:67634585-67762806	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
8	nsv983938	chr14:67656148-67670777	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	esv3340569	chr14:67658624-67661572	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region	2 gene(s)	inside rSNPs	diseases
10	esv3402715	chr14:67658699-67661472	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67648200-67660400	Weak transcription	Ovary	ovary
2	chr14:67648400-67658800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:67655000-67661800	Weak transcription	A549	lung
4	chr14:67655400-67658800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr14:67658200-67658800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr14:67658200-67659000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:67658200-67659000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr14:67658200-67659000	Enhancers	HSMMtube	muscle
9	chr14:67658200-67659000	Enhancers	NH-A	brain
10	chr14:67658200-67659400	Enhancers	HSMM	muscle
11	chr14:67658400-67658800	Active TSS	Brain Cingulate Gyrus	brain
12	chr14:67658400-67658800	Active TSS	Brain Inferior Temporal Lobe	brain
13	chr14:67658400-67659000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr14:67658400-67659000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr14:67658400-67659000	Flanking Active TSS	Brain Substantia Nigra	brain
16	chr14:67658400-67659400	Enhancers	Cortex derived primary cultured neurospheres	brain
17	chr14:67658400-67659400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr14:67658600-67658800	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr14:67658600-67658800	Active TSS	Brain Angular Gyrus	brain
20	chr14:67658600-67658800	Active TSS	Brain Hippocampus Middle	brain
21	chr14:67658600-67658800	Flanking Active TSS	Osteobl	bone
22	chr14:67658600-67659000	Active TSS	Brain Anterior Caudate	brain
23	chr14:67658600-67659400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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