The 2.0 version of rSNPBase

Variant report

Variant rs6034497
Chromosome Location chr20:16464676-16464677
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16410200-16473200 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr20:16420800-16471400 Weak transcription Primary hematopoietic stem cells blood
3 chr20:16431400-16508200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr20:16436600-16464800 Weak transcription Small Intestine intestine
5 chr20:16440400-16468800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr20:16443600-16468600 Weak transcription Fetal Muscle Trunk muscle
7 chr20:16443800-16469600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr20:16443800-16469600 Weak transcription Lung lung
9 chr20:16444000-16466800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr20:16448000-16483600 Weak transcription Pancreas Pancrea
11 chr20:16449400-16500600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr20:16451200-16488400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr20:16451400-16478600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr20:16453000-16469600 Weak transcription Ovary ovary
15 chr20:16453400-16470000 Weak transcription Esophagus oesophagus
16 chr20:16453400-16473400 Weak transcription Left Ventricle heart
17 chr20:16453600-16471800 Weak transcription NHEK skin
18 chr20:16453600-16508200 Weak transcription Stomach Mucosa stomach
19 chr20:16454400-16467200 Weak transcription K562 blood
20 chr20:16454800-16483600 Weak transcription Spleen Spleen
21 chr20:16455400-16467600 Weak transcription Psoas Muscle Psoas
22 chr20:16455600-16468800 Weak transcription Colonic Mucosa Colon
23 chr20:16456200-16483800 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr20:16456400-16468600 Weak transcription Brain Cingulate Gyrus brain
25 chr20:16456800-16465000 Weak transcription Brain Anterior Caudate brain
26 chr20:16456800-16465600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr20:16456800-16465800 Weak transcription HSMMtube muscle
28 chr20:16456800-16466600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr20:16456800-16467200 Weak transcription Fetal Heart heart
30 chr20:16456800-16468800 Weak transcription Brain Substantia Nigra brain
31 chr20:16456800-16469200 Weak transcription Brain Hippocampus Middle brain
32 chr20:16456800-16471600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr20:16456800-16472200 Weak transcription Liver Liver
34 chr20:16456800-16473800 Weak transcription Primary B cells from cord blood blood
35 chr20:16456800-16487600 Weak transcription Brain Inferior Temporal Lobe brain
36 chr20:16456800-16488200 Weak transcription Rectal Smooth Muscle rectum
37 chr20:16458600-16476400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr20:16458600-16484200 Weak transcription A549 lung
39 chr20:16458800-16471200 Weak transcription Primary monocytes fromperipheralblood blood
40 chr20:16458800-16471200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr20:16458800-16471400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr20:16458800-16477400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr20:16458800-16480800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr20:16458800-16484000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr20:16458800-16486200 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr20:16459000-16471400 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr20:16459600-16465200 Strong transcription Duodenum Mucosa Duodenum
48 chr20:16460000-16469600 Weak transcription Fetal Stomach stomach
49 chr20:16460800-16465800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr20:16460800-16473800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015