Variant report

Variant	rs603731
Chromosome Location	chr18:24382414-24382415
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1435420	0.87[EUR][1000 genomes]
rs1435421	0.87[EUR][1000 genomes]
rs1786651	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs487455	0.80[ASN][1000 genomes]
rs491718	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs495970	0.89[ASN][1000 genomes]
rs536381	0.86[ASN][1000 genomes]
rs583692	0.86[ASN][1000 genomes]
rs621765	0.86[ASN][1000 genomes]
rs647839	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs656741	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761995	chr18:24214286-24502570	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:24381600-24385000	Enhancers	Dnd41	blood
2	chr18:24382400-24382600	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr18:24382400-24385600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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