Variant report

Variant rs6040449
Chromosome Location chr20:11209522-11209523
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:11195600-11210200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr20:11203000-11210400 Weak transcription Ovary ovary
3 chr20:11207600-11216400 Enhancers Cortex derived primary cultured neurospheres brain
4 chr20:11208400-11210400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr20:11208600-11210400 Weak transcription Fetal Kidney kidney
6 chr20:11208800-11209600 Enhancers Psoas Muscle Psoas
7 chr20:11208800-11211800 Enhancers Fetal Muscle Leg muscle
8 chr20:11209000-11210800 Enhancers Fetal Stomach stomach
9 chr20:11209200-11209600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr20:11209200-11209600 Enhancers NHDF-Ad bronchial
11 chr20:11209200-11209800 Enhancers Fetal Muscle Trunk muscle
12 chr20:11209200-11209800 Enhancers Pancreas Pancrea
13 chr20:11209200-11209800 Enhancers Skeletal Muscle Female skeletal muscle
14 chr20:11209200-11210200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr20:11209200-11211000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr20:11209200-11211000 Enhancers Brain Hippocampus Middle brain
17 chr20:11209200-11211000 Enhancers Right Atrium heart
18 chr20:11209200-11211000 Enhancers Skeletal Muscle Male skeletal muscle
19 chr20:11209200-11211200 Enhancers Osteobl bone
20 chr20:11209200-11211400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr20:11209400-11209600 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr20:11209400-11209600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr20:11209400-11209600 Enhancers Left Ventricle heart
24 chr20:11209400-11209600 Enhancers Lung lung
25 chr20:11209400-11209800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr20:11209400-11210000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr20:11209400-11210000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr20:11209400-11210200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr20:11209400-11210200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr20:11209400-11210200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr20:11209400-11210400 Weak transcription Aorta Aorta
32 chr20:11209400-11210400 Weak transcription Brain Cingulate Gyrus brain
33 chr20:11209400-11210600 Enhancers Muscle Satellite Cultured Cells --
34 chr20:11209400-11210800 Enhancers Adipose Nuclei Adipose
35 chr20:11209400-11211000 Enhancers Brain Angular Gyrus brain
36 chr20:11209400-11211200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr20:11209400-11214600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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