Variant report

Variant rs60404983
Chromosome Location chr3:52587988-52587989
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52571400-52594200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:52572400-52594200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr3:52572400-52633000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:52573200-52589600 Strong transcription iPS-20b Cell Line embryonic stem cell
5 chr3:52573200-52590400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr3:52573400-52595000 Weak transcription Stomach Mucosa stomach
7 chr3:52573600-52598400 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr3:52574200-52588400 Strong transcription Liver Liver
9 chr3:52574400-52623800 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr3:52574600-52594200 Weak transcription K562 blood
11 chr3:52574600-52598800 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr3:52574800-52605000 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr3:52576000-52590400 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr3:52576800-52625600 Strong transcription Fetal Thymus thymus
15 chr3:52577000-52599000 Strong transcription Fetal Muscle Leg muscle
16 chr3:52577200-52599000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr3:52577600-52595400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr3:52577600-52598600 Strong transcription Placenta Placenta
19 chr3:52577600-52605200 Strong transcription Dnd41 blood
20 chr3:52578000-52595400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr3:52578200-52591200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr3:52578200-52625600 Strong transcription Primary monocytes fromperipheralblood blood
23 chr3:52578400-52588800 Strong transcription NH-A brain
24 chr3:52578400-52598600 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr3:52578400-52600600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr3:52578800-52598200 Strong transcription Primary B cells from cord blood blood
27 chr3:52578800-52598800 Strong transcription Primary T cells fromperipheralblood blood
28 chr3:52578800-52599600 Strong transcription Fetal Muscle Trunk muscle
29 chr3:52578800-52601400 Strong transcription Primary B cells from peripheral blood blood
30 chr3:52579000-52598600 Strong transcription Thymus Thymus
31 chr3:52579000-52599200 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr3:52579200-52598200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr3:52579400-52589600 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr3:52580400-52589600 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr3:52580400-52590000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr3:52580400-52598400 Strong transcription Duodenum Mucosa Duodenum
37 chr3:52580600-52589600 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr3:52580600-52590800 Strong transcription Fetal Intestine Large intestine
39 chr3:52580600-52598400 Strong transcription Primary T cells from cord blood blood
40 chr3:52580600-52598600 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr3:52580800-52588800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr3:52580800-52589200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr3:52580800-52589400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr3:52580800-52589800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:52580800-52598800 Strong transcription Rectal Mucosa Donor 31 rectum
46 chr3:52581000-52589200 Strong transcription Osteobl bone
47 chr3:52581000-52589400 Strong transcription Brain Inferior Temporal Lobe brain
48 chr3:52581000-52594600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr3:52581000-52598400 Strong transcription HUVEC blood vessel
50 chr3:52581000-52601000 Strong transcription Primary mononuclear cells fromperipheralblood Blood

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