Variant report

Variant rs6042960
Chromosome Location chr20:14860884-14860885
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:14857400-14861000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
2 chr20:14858400-14861400 Enhancers HMEC breast
3 chr20:14858600-14861200 Enhancers NHEK skin
4 chr20:14858600-14861600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr20:14859400-14861000 Flanking Active TSS A549 lung
6 chr20:14859400-14861200 Enhancers Hela-S3 cervix
7 chr20:14859400-14861800 Enhancers HepG2 liver
8 chr20:14859400-14862600 Enhancers Duodenum Mucosa Duodenum
9 chr20:14859600-14861000 Enhancers Muscle Satellite Cultured Cells --
10 chr20:14859800-14861000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr20:14859800-14861000 Enhancers HUVEC blood vessel
12 chr20:14860000-14861400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr20:14860200-14862400 Enhancers Fetal Intestine Large intestine
14 chr20:14860200-14865600 Weak transcription Stomach Mucosa stomach
15 chr20:14860400-14861000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr20:14860600-14861000 Active TSS Brain Cingulate Gyrus brain
17 chr20:14860600-14861000 Flanking Active TSS Brain Hippocampus Middle brain
18 chr20:14860600-14861000 Flanking Active TSS Brain Substantia Nigra brain
19 chr20:14860600-14861000 Active TSS Skeletal Muscle Male skeletal muscle
20 chr20:14860600-14861200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr20:14860600-14861200 Enhancers Placenta Amnion Placenta Amnion
22 chr20:14860600-14861600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr20:14860600-14863800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr20:14860800-14861000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr20:14860800-14861000 Flanking Active TSS Brain Angular Gyrus brain
26 chr20:14860800-14861000 Flanking Active TSS Brain Inferior Temporal Lobe brain
27 chr20:14860800-14861200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr20:14860800-14861600 Weak transcription Fetal Intestine Small intestine
29 chr20:14860800-14864000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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