Variant report

Variant	rs60439913
Chromosome Location	chr6:11616282-11616283
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:11615083..11617199-chr6:12286030..12287822,2	MCF-7	breast:

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2128592	chr6:11616092-11616614	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
2	esv3491999	chr6:11616156-11616516	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv3492004	chr6:11616177-11616492	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3492000	chr6:11616200-11616460	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv3492002	chr6:11616206-11616441	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
6	esv3492001	chr6:11616221-11616460	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3472140	chr6:11616226-11616432	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3447008	chr6:11616241-11616430	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv5304	chr6:11616247-11616507	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3472142	chr6:11616258-11616412	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3492003	chr6:11616273-11616405	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3472143	chr6:11616274-11616420	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3492005	chr6:11616274-11616420	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv994799	chr6:11616279-11616409	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11610200-11631400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr6:11611200-11616400	Weak transcription	Left Ventricle	heart
3	chr6:11611200-11616400	Weak transcription	Ovary	ovary
4	chr6:11611200-11616400	Weak transcription	Psoas Muscle	Psoas
5	chr6:11611200-11622600	Weak transcription	Fetal Muscle Leg	muscle
6	chr6:11612400-11616400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr6:11612800-11617000	Enhancers	HSMMtube	muscle
8	chr6:11613000-11616600	Enhancers	NHLF	lung
9	chr6:11613000-11616800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr6:11613200-11616400	Enhancers	NH-A	brain
11	chr6:11613200-11616800	Enhancers	Hela-S3	cervix
12	chr6:11613200-11617000	Enhancers	NHDF-Ad	bronchial
13	chr6:11613200-11617000	Enhancers	Osteobl	bone
14	chr6:11613200-11617200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr6:11613600-11616800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr6:11613600-11617000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr6:11613800-11616600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr6:11613800-11617000	Enhancers	HSMM	muscle
19	chr6:11614200-11616400	Weak transcription	Rectal Smooth Muscle	rectum
20	chr6:11614400-11616800	Enhancers	Placenta	Placenta
21	chr6:11614400-11617000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr6:11614800-11617000	Enhancers	HUVEC	blood vessel
23	chr6:11615400-11617000	Enhancers	Muscle Satellite Cultured Cells	--
24	chr6:11615600-11616400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr6:11615600-11616400	Enhancers	Colon Smooth Muscle	Colon
26	chr6:11615600-11616400	Weak transcription	Lung	lung
27	chr6:11615600-11616400	Weak transcription	A549	lung
28	chr6:11615600-11617000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr6:11615600-11621400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr6:11615800-11616400	Weak transcription	Skeletal Muscle Female	skeletal muscle
31	chr6:11616000-11616800	Enhancers	Stomach Smooth Muscle	stomach
32	chr6:11616200-11617000	Enhancers	Placenta Amnion	Placenta Amnion

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