The 2.0 version of rSNPBase

Variant report

Variant rs60501641
Chromosome Location chr11:8759795-8759796
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8736200-8773800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr11:8746600-8783000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:8750800-8760200 Weak transcription Fetal Brain Male brain
4 chr11:8752600-8769800 Weak transcription Colonic Mucosa Colon
5 chr11:8752600-8775200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr11:8753000-8780600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr11:8754600-8771000 Weak transcription Placenta Amnion Placenta Amnion
8 chr11:8754600-8778400 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr11:8754800-8760600 Strong transcription Fetal Stomach stomach
10 chr11:8754800-8762400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr11:8755200-8760400 Weak transcription Aorta Aorta
12 chr11:8755200-8762200 Weak transcription Brain Anterior Caudate brain
13 chr11:8755200-8762400 Weak transcription Brain Hippocampus Middle brain
14 chr11:8755200-8767000 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr11:8755200-8771600 Weak transcription Hela-S3 cervix
16 chr11:8755200-8774200 Weak transcription Brain Angular Gyrus brain
17 chr11:8755200-8778200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr11:8755400-8763800 Genic enhancers Breast Myoepithelial Primary Cells Breast
19 chr11:8755400-8770600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr11:8755600-8760400 Weak transcription Pancreas Pancrea
21 chr11:8755600-8763000 Strong transcription Fetal Muscle Leg muscle
22 chr11:8755600-8768200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr11:8755600-8777200 Weak transcription Psoas Muscle Psoas
24 chr11:8755800-8760200 Weak transcription A549 lung
25 chr11:8755800-8760800 Weak transcription Brain Substantia Nigra brain
26 chr11:8755800-8761200 Weak transcription Rectal Smooth Muscle rectum
27 chr11:8755800-8762400 Weak transcription HSMM muscle
28 chr11:8755800-8764000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr11:8755800-8767000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr11:8755800-8770200 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr11:8755800-8780800 Weak transcription Brain Cingulate Gyrus brain
32 chr11:8756000-8761200 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr11:8756000-8761800 Weak transcription NHDF-Ad bronchial
34 chr11:8756000-8765200 Weak transcription HMEC breast
35 chr11:8756000-8768400 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr11:8756000-8768400 Weak transcription Stomach Mucosa stomach
37 chr11:8756000-8776000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr11:8756200-8767800 Weak transcription Small Intestine intestine
39 chr11:8756600-8761200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr11:8756800-8760000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr11:8756800-8761000 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr11:8757000-8760800 Strong transcription Liver Liver
43 chr11:8757200-8760800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr11:8757200-8761800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr11:8757400-8766800 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr11:8757400-8767200 Weak transcription Fetal Intestine Large intestine
47 chr11:8757400-8777400 Weak transcription Adipose Nuclei Adipose
48 chr11:8757600-8760200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr11:8757600-8767000 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr11:8757800-8777800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015