The 2.0 version of rSNPBase

Variant report

Variant rs6050244
Chromosome Location chr20:24984882-24984883
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24974000-24985800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr20:24974000-24985800 Weak transcription Thymus Thymus
3 chr20:24974000-24986400 Weak transcription Aorta Aorta
4 chr20:24974200-24985200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr20:24974200-24985800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr20:24974200-24988200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr20:24974400-24992000 Weak transcription GM12878-XiMat blood
8 chr20:24974800-24985800 Weak transcription Spleen Spleen
9 chr20:24975800-24986400 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr20:24976000-24985000 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr20:24976000-24985000 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr20:24976000-24985800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr20:24976000-24985800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr20:24976000-24986000 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr20:24976000-24986000 Weak transcription Colonic Mucosa Colon
16 chr20:24976000-24986400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr20:24976000-24986400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr20:24976000-24987600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr20:24976000-24988000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr20:24976000-24999000 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr20:24976200-24985800 Weak transcription Primary monocytes fromperipheralblood blood
22 chr20:24976200-24985800 Weak transcription Adipose Nuclei Adipose
23 chr20:24976200-24985800 Weak transcription Lung lung
24 chr20:24976200-24986200 Weak transcription Dnd41 blood
25 chr20:24976800-24986000 Weak transcription Brain Germinal Matrix brain
26 chr20:24977000-24986600 Weak transcription Fetal Thymus thymus
27 chr20:24979000-24987400 Weak transcription Small Intestine intestine
28 chr20:24979400-24986000 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr20:24980000-24985800 Weak transcription Gastric stomach
30 chr20:24980600-24986200 Weak transcription Right Atrium heart
31 chr20:24981200-24985200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr20:24981200-24985800 Weak transcription Brain Substantia Nigra brain
33 chr20:24981200-24986200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr20:24981200-24986600 Weak transcription Esophagus oesophagus
35 chr20:24981400-24985200 Weak transcription Colon Smooth Muscle Colon
36 chr20:24981400-24985800 Weak transcription Brain Cingulate Gyrus brain
37 chr20:24981400-24986200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr20:24981400-24986600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr20:24981600-24985200 Weak transcription Stomach Smooth Muscle stomach
40 chr20:24981600-24985600 Weak transcription Duodenum Mucosa Duodenum
41 chr20:24981600-24986000 Weak transcription Placenta Amnion Placenta Amnion
42 chr20:24981600-24986000 Weak transcription Rectal Smooth Muscle rectum
43 chr20:24981600-24986200 Weak transcription Brain Anterior Caudate brain
44 chr20:24981600-24986400 Weak transcription Brain Hippocampus Middle brain
45 chr20:24981600-24986400 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr20:24981600-24987400 Weak transcription Stomach Mucosa stomach
47 chr20:24981600-24989600 Weak transcription Brain Angular Gyrus brain
48 chr20:24981600-25003600 Weak transcription Fetal Heart heart
49 chr20:24981800-24985200 Weak transcription Left Ventricle heart
50 chr20:24981800-24985600 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015