Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr2:100133047-100133283	HepG2	liver:	n/a	chr2:100133151-100133162
2	MAFF	chr2:100133080-100133357	HepG2	liver:	n/a	n/a

Variant related genes	Relation type
ENSG00000222274	TF binding region

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11123785	0.83[AMR][1000 genomes]
rs12053566	0.81[AMR][1000 genomes]
rs12233086	0.83[AMR][1000 genomes]
rs12233126	0.83[AMR][1000 genomes]
rs1451245	0.81[AMR][1000 genomes]
rs2242036	0.83[AMR][1000 genomes]
rs28369925	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs28382892	0.93[AMR][1000 genomes]
rs28382949	0.88[AMR][1000 genomes]
rs3791213	0.83[AMR][1000 genomes]
rs3792135	0.81[AMR][1000 genomes]
rs3792136	0.93[AMR][1000 genomes]
rs57043099	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58766196	0.93[AMR][1000 genomes]
rs61577246	0.81[AMR][1000 genomes]
rs6706607	0.80[ASN][1000 genomes]
rs6727483	0.90[AMR][1000 genomes]
rs6728175	0.89[AMR][1000 genomes]
rs72956308	0.80[AMR][1000 genomes]
rs72956312	0.83[AMR][1000 genomes]
rs72956317	0.83[AMR][1000 genomes]
rs72956346	0.81[AMR][1000 genomes]
rs72956387	0.90[AMR][1000 genomes]
rs72958366	0.93[AMR][1000 genomes]
rs72958380	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9941566	0.90[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431424	chr2:99652682-100494682	Flanking Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
2	nsv962113	chr2:100022168-100317461	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:100132600-100135000	Weak transcription	Primary neutrophils fromperipheralblood	blood

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