The 2.0 version of rSNPBase

Variant report

Variant rs60625383
Chromosome Location chr19:38651322-38651323
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38600600-38652800 Weak transcription NHDF-Ad bronchial
2 chr19:38611000-38652800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr19:38611600-38653000 Weak transcription HUVEC blood vessel
4 chr19:38611800-38653000 Weak transcription Fetal Kidney kidney
5 chr19:38613800-38652200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr19:38613800-38652600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr19:38616000-38652600 Strong transcription Primary B cells from peripheral blood blood
8 chr19:38617000-38652000 Strong transcription Fetal Intestine Small intestine
9 chr19:38624400-38652400 Weak transcription Fetal Thymus thymus
10 chr19:38626400-38652200 Strong transcription A549 lung
11 chr19:38627000-38652400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr19:38628400-38652600 Weak transcription Right Atrium heart
13 chr19:38629200-38652600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr19:38629600-38651600 Strong transcription GM12878-XiMat blood
15 chr19:38633000-38652400 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr19:38633200-38652800 Weak transcription Colon Smooth Muscle Colon
17 chr19:38633400-38653000 Weak transcription Fetal Brain Male brain
18 chr19:38635400-38652600 Weak transcription Stomach Mucosa stomach
19 chr19:38636600-38652600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr19:38637000-38652400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr19:38637000-38652800 Weak transcription Brain Substantia Nigra brain
22 chr19:38638200-38667200 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr19:38641600-38652800 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr19:38643200-38652600 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr19:38643800-38652600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr19:38643800-38652600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr19:38643800-38652600 Weak transcription Small Intestine intestine
28 chr19:38643800-38652800 Weak transcription Left Ventricle heart
29 chr19:38643800-38654800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr19:38644000-38652200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr19:38644000-38652400 Weak transcription HepG2 liver
32 chr19:38644000-38652400 Weak transcription NHEK skin
33 chr19:38644000-38652800 Weak transcription Placenta Placenta
34 chr19:38644000-38659200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr19:38644200-38652000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:38644400-38652800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr19:38645000-38652200 Weak transcription Dnd41 blood
38 chr19:38645000-38652400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr19:38645000-38652400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr19:38645000-38652400 Weak transcription Fetal Heart heart
41 chr19:38645000-38652400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr19:38645000-38652400 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr19:38645000-38652600 Weak transcription H1 Cell Line embryonic stem cell
44 chr19:38645000-38652600 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr19:38645000-38652600 Weak transcription Brain Anterior Caudate brain
46 chr19:38645000-38652600 Weak transcription Placenta Amnion Placenta Amnion
47 chr19:38645000-38652600 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr19:38645000-38652600 Weak transcription NH-A brain
49 chr19:38645200-38652600 Weak transcription Primary T cells fromperipheralblood blood
50 chr19:38645600-38660800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015