Variant report

Variant rs60673098
Chromosome Location chr1:92265912-92265913
allele -/GT/GTGTGT
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92248200-92268800 Weak transcription Duodenum Mucosa Duodenum
2 chr1:92248600-92268800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:92254000-92269400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:92257600-92279400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:92257800-92269600 Weak transcription A549 lung
6 chr1:92258000-92268400 Weak transcription Fetal Thymus thymus
7 chr1:92258200-92269400 Weak transcription Hela-S3 cervix
8 chr1:92258400-92271400 Weak transcription Fetal Intestine Small intestine
9 chr1:92258600-92268600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:92258600-92270000 Weak transcription H1 Cell Line embryonic stem cell
11 chr1:92258800-92272400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:92260400-92271200 Strong transcription HepG2 liver
13 chr1:92260800-92268800 Weak transcription Small Intestine intestine
14 chr1:92261800-92268600 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:92262200-92268400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:92262200-92269200 Weak transcription Fetal Kidney kidney
17 chr1:92262200-92269400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:92262800-92277000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:92263000-92266200 Enhancers Breast Myoepithelial Primary Cells Breast
20 chr1:92263000-92268000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:92263000-92269200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:92263000-92269600 Weak transcription Liver Liver
23 chr1:92263000-92270000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:92263200-92268600 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr1:92263400-92266000 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr1:92263600-92266400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:92264200-92268200 Weak transcription Esophagus oesophagus
28 chr1:92264400-92268400 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr1:92264400-92268800 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:92264400-92269000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:92264600-92271800 Weak transcription Aorta Aorta
32 chr1:92264800-92268200 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr1:92264800-92269000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:92264800-92269600 Weak transcription Osteobl bone
35 chr1:92264800-92284200 Weak transcription Brain Cingulate Gyrus brain
36 chr1:92265000-92266000 Weak transcription Spleen Spleen
37 chr1:92265000-92266800 Weak transcription Fetal Lung lung
38 chr1:92265000-92267400 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr1:92265000-92268200 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr1:92265000-92268400 Weak transcription Lung lung
41 chr1:92265000-92268400 Weak transcription Psoas Muscle Psoas
42 chr1:92265000-92268800 Weak transcription Brain Anterior Caudate brain
43 chr1:92265000-92269200 Weak transcription Colonic Mucosa Colon
44 chr1:92265000-92269400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:92265000-92269400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:92265000-92269800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:92265200-92268200 Weak transcription Placenta Placenta
48 chr1:92265200-92268600 Weak transcription Fetal Muscle Trunk muscle
49 chr1:92265200-92270000 Weak transcription Brain Hippocampus Middle brain
50 chr1:92265200-92271400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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