The 2.0 version of rSNPBase

Variant report

Variant rs60679344
Chromosome Location chr5:151163152-151163153
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:151153000-151167400 Weak transcription Esophagus oesophagus
2 chr5:151153000-151167400 Weak transcription Lung lung
3 chr5:151153000-151167600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:151153800-151165200 Enhancers Primary T killer memory cells from peripheral blood blood
5 chr5:151153800-151166800 Weak transcription Colonic Mucosa Colon
6 chr5:151153800-151167400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr5:151153800-151169800 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr5:151154400-151168800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:151154400-151169000 Weak transcription HSMMtube muscle
10 chr5:151154600-151168800 Weak transcription Placenta Amnion Placenta Amnion
11 chr5:151154800-151165000 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr5:151155200-151163600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr5:151155200-151167600 Weak transcription Spleen Spleen
14 chr5:151155800-151163800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr5:151155800-151167400 Weak transcription Stomach Smooth Muscle stomach
16 chr5:151155800-151172200 Weak transcription Aorta Aorta
17 chr5:151155800-151177000 Weak transcription Fetal Brain Male brain
18 chr5:151156200-151166000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr5:151156200-151167800 Weak transcription Brain Germinal Matrix brain
20 chr5:151156800-151166800 Weak transcription Brain Cingulate Gyrus brain
21 chr5:151156800-151168200 Weak transcription NHLF lung
22 chr5:151157000-151165800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr5:151157200-151166200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr5:151157400-151167200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr5:151157600-151163400 Weak transcription Small Intestine intestine
26 chr5:151157600-151165200 Enhancers Primary T helper naive cells from peripheral blood blood
27 chr5:151157800-151164000 Weak transcription Fetal Kidney kidney
28 chr5:151157800-151166000 Weak transcription Thymus Thymus
29 chr5:151158000-151163600 Weak transcription Primary hematopoietic stem cells blood
30 chr5:151158000-151164400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr5:151158000-151165800 Weak transcription Primary monocytes fromperipheralblood blood
32 chr5:151158000-151167200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr5:151158000-151168800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr5:151158200-151163400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
35 chr5:151158200-151164000 Enhancers Primary T cells from cord blood blood
36 chr5:151158200-151165600 Enhancers Primary T helper cells fromperipheralblood blood
37 chr5:151158200-151166000 Weak transcription Placenta Placenta
38 chr5:151158200-151166000 Weak transcription NHEK skin
39 chr5:151158200-151167200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr5:151158200-151171200 Weak transcription Right Ventricle heart
41 chr5:151158600-151165000 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr5:151158600-151166200 Weak transcription Fetal Stomach stomach
43 chr5:151158600-151167600 Weak transcription Fetal Muscle Trunk muscle
44 chr5:151158800-151165600 Weak transcription Fetal Intestine Small intestine
45 chr5:151158800-151165800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr5:151158800-151166000 Weak transcription Fetal Thymus thymus
47 chr5:151158800-151166600 Weak transcription Fetal Intestine Large intestine
48 chr5:151158800-151167200 Weak transcription Fetal Muscle Leg muscle
49 chr5:151158800-151167400 Weak transcription Pancreas Pancrea
50 chr5:151159000-151165800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015