Variant report

Variant	rs60681931
Chromosome Location	chr8:58846267-58846268
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:58845538..58847740-chr8:58848802..58850911,2	K562	blood:
2	chr8:58843787..58847894-chr8:58848419..58852033,3	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs56283964	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831323	chr8:58692548-58849862	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv611411	chr8:58835639-58878786	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv831324	chr8:58844151-59045309	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58841200-58849800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr8:58842200-58847000	Enhancers	Fetal Heart	heart
3	chr8:58842400-58851000	Enhancers	Fetal Lung	lung
4	chr8:58843200-58847400	Enhancers	NHDF-Ad	bronchial
5	chr8:58843800-58849200	Weak transcription	Fetal Intestine Small	intestine
6	chr8:58844200-58846400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr8:58844200-58846400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr8:58845000-58847600	Enhancers	Adipose Nuclei	Adipose
9	chr8:58845200-58846600	Enhancers	Fetal Stomach	stomach
10	chr8:58845600-58846800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr8:58845600-58846800	Enhancers	Fetal Kidney	kidney
12	chr8:58845600-58847000	Enhancers	Primary neutrophils fromperipheralblood	blood
13	chr8:58845600-58847200	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr8:58845600-58847400	Enhancers	Fetal Muscle Leg	muscle
15	chr8:58846000-58846400	Weak transcription	NHLF	lung
16	chr8:58846200-58846400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr8:58846200-58846600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr8:58846200-58846600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr8:58846200-58846600	Enhancers	Fetal Muscle Trunk	muscle
20	chr8:58846200-58846600	Enhancers	Left Ventricle	heart
21	chr8:58846200-58847000	Enhancers	Right Atrium	heart
22	chr8:58846200-58847400	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr8:58846200-58847400	Enhancers	Placenta	Placenta
24	chr8:58846200-58847600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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